Vibrio parahaemolyticus BB22OP: VPBB_2003
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Entry
VPBB_2003 CDS
T02409
Name
(GenBank) Cyn operon transcriptional activator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VPBB_2003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpb03000
]
VPBB_2003
Transcription factors [BR:
vpb03000
]
Prokaryotic type
Helix-turn-helix
LysR family
VPBB_2003
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AGB10472
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All DBs
Position
1:2230689..2231564
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AA seq
291 aa
AA seq
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MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSVNLRLLNRHARKLSLTEA
GERFYHECSPLLQRLTSTAEEITDDCRGASGKIKISAPYNLTKRMMMPMFNDFMKKYPDI
NIELTTENNADQLDPTEWDVIFRVGPQRDSSLIARKIGEVKDILVASQDYLAANPAPNHA
EELSNHSLLKGYPLIKWTLINSKGESVVNVERGRFQANALNVVRSACSEGLGITLMPDVM
IKEYIESGELLRVLPDWSANPRDIYMLYNHKDHLPEKVRLFIDFVIAYNIH
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgatttgaacctgtttcgactggttgtcgaaaatgggagctataccgca
acttcgcgaaaaaccatgatcccggtggcaaccatcacccgacgcattcaagcgctagaa
gactctgtcaatcttcgactattgaaccgtcacgcacgtaagctttctctgactgaagcc
ggagaacgcttttaccatgaatgctctcccctacttcaaaggctgacatcaaccgcggaa
gaaatcaccgatgactgccgcggtgcatcaggcaaaattaaaatttctgcgccttacaat
ctgaccaagcgcatgatgatgccgatgtttaatgacttcatgaagaagtatccggatatc
aatatcgagctgacgacagagaacaacgcagatcaattagacccaacggaatgggatgtt
attttccgtgttggtccgcaacgagattccagcctaattgctcgtaaaattggcgaagta
aaagatattttggttgccagccaagactatctagcagccaaccctgcgccaaaccacgca
gaagagctctcaaaccactctttgctaaaaggctacccacttatcaagtggacactgatc
aacagcaaaggtgagtctgtggtgaacgtagagcgtggtcgtttccaagccaacgcactc
aatgttgttcgcagtgcttgttcagaaggtctaggtattacattaatgcctgatgtgatg
attaaggaatacatcgaaagtggtgaattgttgcgagtattgccagattggagcgcaaac
ccgcgcgacatctacatgctgtacaaccacaaagatcacttgccagagaaagtgcgtctg
ttcatcgactttgtgattgcctacaacattcactaa
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