Vibrio parahaemolyticus BB22OP: VPBB_2085
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Entry
VPBB_2085 CDS
T02409
Name
(GenBank) N-succinyl-L,L-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00300
Lysine biosynthesis
vpb01100
Metabolic pathways
vpb01120
Microbial metabolism in diverse environments
vpb01230
Biosynthesis of amino acids
Module
vpb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VPBB_2085
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vpb01002
]
VPBB_2085
Enzymes [BR:
vpb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
VPBB_2085
Peptidases and inhibitors [BR:
vpb01002
]
Metallo peptidases
Family M20
VPBB_2085
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
STELLO
Motif
Other DBs
NCBI-ProteinID:
AGB10551
LinkDB
All DBs
Position
1:2316520..2317656
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AA seq
378 aa
AA seq
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MTDSPVLALAKDLISRQSVTPEDAGCQDLMIERLKALGFEIEVMVFEDTTNFWARRGNEA
PLFAFAGHTDVVPAGKLEQWDTPPFEPTIIDGYLYGRGAADMKGSLAAMVVAVERFIAEH
PDHKGSIGFLITSDEEGPFINGTVRVVEALMERGENIDMCIVGEPSSTEIVGDVVKNGRR
GSITGDLTVKGTQGHVAYPHLANNPVHASLLAIHELATTEWDKGNDYFPPTSFQIPNVSA
GTGASNVIPGEFNVQFNLRFSTELNNDTIVQRVTETLDKHDLNYDLHWTFNGDPFLTDTG
ALLDAVVAAVAEVNNTKPALLTTGGTSDGRFIARMGGQVVELGPVNATIHKVNECVKVDD
LEKLTDMYENTLKHLLAK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagtccagtactggcacttgcaaaagacctgatcagccgccagtccgtaaca
cctgaagatgcaggttgtcaggacctaatgatcgagcgtttaaaagcgctcggttttgaa
attgaagtcatggtgtttgaagacaccaccaacttttgggcgcgtcgcggtaacgaagca
ccattgtttgctttcgcaggtcacacagatgttgtacccgcaggcaagctagagcaatgg
gatacaccaccgttcgagccaaccatcatcgatggctacctttatggtcgtggtgcagcc
gatatgaaaggctctttggcggcgatggtagtggccgttgaacgcttcattgccgagcac
ccagatcacaaaggctcgattggctttttgatcacttctgatgaggaaggtcctttcatt
aacggtaccgttcgcgtcgtagaagcgctgatggaacgtggtgagaacatcgatatgtgc
atcgttggtgagccttctagtacagaaattgtgggtgatgttgtgaaaaatggccgccgt
ggttcaattaccggtgacctaaccgtaaaaggcacacaaggtcatgtggcctaccctcac
ctcgctaataaccctgttcacgcatcgctacttgccatccacgaactggcaacaacagag
tgggataaaggcaatgattacttcccgccaacaagcttccagattcccaatgtatctgcg
ggtacaggggcatctaacgtgattcctggcgaattcaacgttcaattcaacctacgtttt
agcaccgaactgaacaatgacactatcgtccagcgcgtaacagaaacactggataagcat
gatctcaactacgatctacattggacattcaacggcgacccattcttaacggacacgggt
gccctacttgatgctgtggtcgctgccgtagcggaagtgaacaacactaaaccagctctg
ctcacaacggggggtacatcagacggacgtttcattgctcgcatgggcggtcaagttgtt
gagcttggacctgtcaatgccacgattcacaaagtgaacgagtgcgtaaaagtggacgat
cttgagaagttgactgacatgtacgaaaacaccttaaaacacctactcgcgaagtaa
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