Vibrio parahaemolyticus BB22OP: VPBB_2280
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Entry
VPBB_2280 CDS
T02409
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpb03016
]
VPBB_2280
Enzymes [BR:
vpb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VPBB_2280
Transfer RNA biogenesis [BR:
vpb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VPBB_2280
Prokaryotic type
VPBB_2280
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGB10740
LinkDB
All DBs
Position
1:complement(2541483..2542427)
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AA seq
314 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVDVTLEKLEACIEKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIILHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTAVAKYPYEKMVTLEHLNELLEQAHREEIAPRELLDPLL
MPMDTAVEDLPEVNLIPELADMVQHGQPVQVLGAPEQGVLRLTMGEERLFIGVGEMNDDG
KIAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggtgttatcttgttggataaaccaaca
ggtatctcttccaatgatgcactgcaaaaagtaaagcgaatctactttgctgaaaaagcg
ggtcacactggtgcgttggaccctctagcgacgggtatgttgccgatctgtttaggtgaa
gcaaccaagttttctcagttccttctggattcagacaaacgctatcgcgtgatcgcgaaa
cttggcgaacgtactaacacttcagactctgatggtgaagtggtagaaacgcgtccagta
gatgtgactctcgagaaactagaagcgtgtattgagaagttccgtggcgaatctgaccaa
gtgccttcgatgttttctgctttgaaataccaaggcaaacctctgtacgagtacgctcgt
aaaggtatcgaagttccacgtgagtctcgtaaaattacggtatacgaaatcattcttcac
cgttttgaaggtgatgaagttgagatggaggtgcactgttcaaaaggcacttacattcgt
actatcgtcgatgacttgggcgaaatgctcggttgtggtgctcacgtaacgatgctgcgc
cgcacagctgtagccaagtacccttacgagaaaatggtgactcttgagcaccttaatgag
ctacttgagcaagctcatcgtgaagaaatcgctcctcgcgagttgctcgatccactgctt
atgccaatggataccgcagttgaagacttgccagaagtaaacctaattcctgaattagca
gatatggttcagcatggccaaccggttcaagtattaggtgcaccagagcagggagttctg
cgcctaactatgggcgaagagcgtttgtttatcggtgttggtgaaatgaacgatgatggt
aagatcgcaccaaaacgtttagtcgttttccgcgacgaagagtaa
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