Vibrio parahaemolyticus BB22OP: VPBB_2381
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Entry
VPBB_2381 CDS
T02409
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpb03016
]
VPBB_2381
Enzymes [BR:
vpb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VPBB_2381
Transfer RNA biogenesis [BR:
vpb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VPBB_2381
Prokaryotic type
VPBB_2381
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGB10839
LinkDB
All DBs
Position
1:complement(2666978..2668021)
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AA seq
347 aa
AA seq
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MSDILSSLAYLTGKPVASAKIKAQPEHFQVREDLGFAFTGEGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGETPDFSTFLAQYPSIEILATDRH
NKKLRPGDLIGNEFVVTLSEVTDMADVEQRLEKVKQVGVPNYFGSQRFGNDGNNLDEARR
WGRENVRTRNQNKRSMYLSAARSWIFNRIVSARLENGVFDKFIDGDIAQTSQGLLAVDAN
NLADMQNKLALSDVEITAALAGDNALPTQADALALEQPFIDEEPDLMALIRGNRMRHDRR
EIALKPKDLAWNVEGNNITLTFSLDAGSFATSIVRELVNEVKVEREY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattttatcctcattggcttacctcacaggcaagccagtcgcatcagcaaaa
attaaagcgcaaccagaacactttcaggttcgcgaagatttggggtttgccttcacggga
gaaggtgaacacttaatggtgcgcattcgaaaaacaggtgagaacaccagtttcgtcgct
aacgagctagcgaaagcttgtggtgttaagtctaaagacgttagttgggctggcctgaaa
gatcgccatgcagtaaccgaacaatggttaagtgttcatctgcctaaaggtgagactcca
gatttttcgacatttttggcgcaatacccaagtattgaaattctggcgaccgatcgacac
aacaaaaaactgcgtcctggtgacttaatcgggaacgagtttgtggttaccttgtctgaa
gtgacagatatggcggatgtagagcaacgccttgaaaaagttaaacaagttggtgtgcca
aactactttggtagccaacgctttggtaacgatggaaataacctcgacgaagcccgtcgt
tggggacgagaaaacgttcgtacgcgtaaccaaaacaaacgcagcatgtacctgtctgcc
gcgcgttcatggatcttcaaccgcatcgtttctgctcgtctagaaaatggtgtgtttgat
aaattcatcgatggtgacatcgcacagacatcacaaggattgttggctgttgatgcgaat
aaccttgctgatatgcaaaacaagcttgcattgagtgacgttgagattactgccgcttta
gcgggtgataatgcgttaccgacccaagctgatgcacttgcattagaacaaccatttatt
gatgaagaacctgatttaatggctctgatccgtggtaatcgtatgcgtcacgatcgtcgt
gaaatcgcactcaaaccaaaagacttagcttggaacgttgaaggtaacaatattacgttg
accttctcactcgatgcaggctcttttgccacatccattgttcgtgagttggtgaatgag
gtcaaagtagaaagagaatactaa
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