Vibrio parahaemolyticus BB22OP: VPBB_2395
Help
Entry
VPBB_2395 CDS
T02409
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpb03019
]
VPBB_2395
03009 Ribosome biogenesis [BR:
vpb03009
]
VPBB_2395
03036 Chromosome and associated proteins [BR:
vpb03036
]
VPBB_2395
Enzymes [BR:
vpb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
VPBB_2395
Messenger RNA biogenesis [BR:
vpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VPBB_2395
Ribosome biogenesis [BR:
vpb03009
]
Eukaryotic type
90S particles
RNase
VPBB_2395
Prokaryotic type
rRNA processing factors
VPBB_2395
Chromosome and associated proteins [BR:
vpb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
VPBB_2395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGB10852
LinkDB
All DBs
Position
1:complement(2683874..2684551)
Genome browser
AA seq
225 aa
AA seq
DB search
MNSPIDKLERKLGYQFKDAGLINLALTHRSANSKHNERLEFLGDSILSFVIADDLYHRFP
KVNEGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIG
AIYLDSDIEKVRSIVLSWYNSRLEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKG
EAHNQEFTVECEVAGVDKPVIGKGTSRRKAEQAAAETALEQLTNG
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccaattgataaactagagagaaagctcggctaccaatttaaggatgctggg
cttatcaacttggcgctgactcaccgcagcgccaacagcaagcacaatgaacgtcttgag
tttctgggcgattcaattttaagttttgtcatcgctgatgatctgtaccatcgttttccg
aaagtgaacgagggtgacatgagccgtatgcgcgctactctggtacgtgggcacacattg
gcggaactgggtcgtgaattcgatctaggagattatttaaaattaggtccaggtgaattg
aagagtggcggtttccgccgagactctattctagccgatgcggtagaagccattattggt
gcgatttacctagatagtgatattgagaaagtacgcagtattgttctgagttggtacaac
tcgcgtcttgaagccatcaaacctggcgtatcacaaaaagacccaaaaactcgcctacaa
gagttcctgcaaggcagaagaaaaccgctgcctgtctacacagtgactaatattaaaggt
gaagcgcacaaccaagagtttacggttgagtgtgaagtagcaggtgtggataagcctgta
atcggtaaaggcaccagccgccgcaaggcagaacaggcggcagcagaaacagcactagag
caattaactaatggctga
DBGET
integrated database retrieval system
