Vibrio parahaemolyticus BB22OP: VPBB_2413
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Entry
VPBB_2413 CDS
T02409
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00260
Glycine, serine and threonine metabolism
vpb00270
Cysteine and methionine metabolism
vpb00680
Methane metabolism
vpb01100
Metabolic pathways
vpb01110
Biosynthesis of secondary metabolites
vpb01120
Microbial metabolism in diverse environments
vpb01200
Carbon metabolism
vpb01230
Biosynthesis of amino acids
Module
vpb_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
VPBB_2413
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VPBB_2413
00270 Cysteine and methionine metabolism
VPBB_2413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpb04147
]
VPBB_2413
Enzymes [BR:
vpb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
VPBB_2413
1.1.1.399 2-oxoglutarate reductase
VPBB_2413
Exosome [BR:
vpb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VPBB_2413
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Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
ACT_AHAS_ss
ACT
NAD_binding_2
ACT_4
AdoHcyase_NAD
Pyr_redox_2
3HCDH_N
RS_preATP-grasp-like
KARI_N
UDPG_MGDP_dh_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AGB10870
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Position
1:2701177..2702409
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AA seq
410 aa
AA seq
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MAKVSLEKEKIKILLLEGLHPSSVEVLQAAGYTNIEYHKGSLSEEELIEAVKDTHFIGIR
SRTNLSEEVINAANKLVAIGCFCIGTNQVDLGAAAKRGIPVFNAPFSNTRSVAELVLGQI
LLLLRGIPEKNALAHRGIWKKSADNSYEARGKRLGIIGYGHIGTQLGIIAENLGMRVYYY
DIENKLSLGNATQIHTMSELLNKCDVISLHVPETPETKNMMGEEEFARMKPGAIFINAAR
GTVVDIPALCHSLEAGHLAGAAIDVFPVEPKTNADPFESPLQKFDNVILTPHVGGSTQEA
QENIGVEVAGKLAKYSDNGSTLSSVNFPEVSLPEHGRECSRLLHIHKNRPGILTQINTIF
AEEGINIAAQYLQTEAEIGYVVIDVETERSEEALTKLKSIEGTIRARILH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtttcactggaaaaagaaaagattaagatcctcttactcgagggacttcac
ccttcttcagttgaagttcttcaagcagctggttacaccaacattgaatatcacaaaggt
tcgctttcagaggaagaactgattgaagcagttaaagatacgcacttcatcggtatccgc
tcccgaacgaatctatccgaggaagtgatcaatgcggcaaacaaactggttgcgattggc
tgtttttgtatcggaactaaccaagtcgatcttggtgcggcggcaaaacgtggtattcct
gtattcaatgcaccgttttcaaacacgcgaagtgtagcagaactcgtgcttggtcagatt
cttctgctccttcgtgggattcctgaaaagaacgctttagcacaccgtggtatttggaag
aagagcgcagacaactcttacgaagcgcgtggtaaacgtcttggtatcattggttacggc
catatcggtactcagctgggcattattgctgaaaacttaggtatgcgcgtgtactactac
gacatcgaaaacaaactatcacttggcaacgcaacgcaaatccacacgatgagcgagctg
ctaaacaaatgtgatgttatttcgctgcacgtaccagaaacacctgaaacgaagaatatg
atgggcgaagaagaatttgctcgcatgaagcctggcgcaatcttcatcaacgccgctcgc
ggtaccgttgttgatattcctgcgctttgccacagcctagaagcaggtcacttagctggc
gcagcaatcgacgtattcccagttgaaccaaaaacaaacgctgacccgtttgaatctcca
ctacagaaattcgataacgtcattctaacgccacacgtgggcggctctactcaagaagca
caagaaaacatcggcgtggaagtagcgggtaaactggcgaaatattcagataatggttca
acactatcaagcgttaacttccctgaagtatctctgcctgaacatggtcgtgagtgctct
cgcttactgcacattcacaaaaaccgcccaggtattctgactcaaattaacaccatcttc
gcagaagaaggcatcaacatcgcagcgcagtacctacaaactgaagctgagatcggctac
gtagttattgatgtggaaactgagcgttcagaagaagcactaactaagctgaaaagcatt
gaaggcacgattcgtgctcgtattcttcattaa
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