Vibrio parahaemolyticus BB22OP: VPBB_2701
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Entry
VPBB_2701 CDS
T02409
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VPBB_2701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpb03019
]
VPBB_2701
03110 Chaperones and folding catalysts [BR:
vpb03110
]
VPBB_2701
03029 Mitochondrial biogenesis [BR:
vpb03029
]
VPBB_2701
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpb04147
]
VPBB_2701
Enzymes [BR:
vpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VPBB_2701
Messenger RNA biogenesis [BR:
vpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VPBB_2701
Chaperones and folding catalysts [BR:
vpb03110
]
Heat shock proteins
HSP60 / Chaperonin
VPBB_2701
Mitochondrial biogenesis [BR:
vpb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VPBB_2701
Exosome [BR:
vpb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VPBB_2701
Exosomal proteins of other body fluids (saliva and urine)
VPBB_2701
Exosomal proteins of breast cancer cells
VPBB_2701
Exosomal proteins of colorectal cancer cells
VPBB_2701
Exosomal proteins of bladder cancer cells
VPBB_2701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGB11153
LinkDB
All DBs
Position
1:complement(3017141..3018784)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAAVEQLKELSVECNDTKAIAQVGTISANSDASVGNIIAEAMERVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVELENPFILLVDKKISNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLELEKVTLEDLGQAKRVSITKENSTIIDGAGEEAMIQGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKIVDLEGDNEEQNVGIRVALRAMEAPIRQITKNAGDEDSVVANNVKAGEGSYGYNA
ATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKESAGMPDMGGMGG
MGGMGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaatgacgcacgagttaagatgctagaaggtgta
aacgttctggctgacgcagtgaaagtaacactgggtcctaaaggtcgtaacgtagttcta
gataaatctttcggtgctccaaccatcactaaagacggtgtatctgtagcgcgtgaaatt
gagctggaagacaagttccagaacatgggcgcgcaaatggttaaagaagtagcgtctaaa
gcaaacgacgctgcgggtgacggtacaacaacagcaaccgtactagcgcaagcaatcgta
aacgaaggtctaaaagcagttgcagcgggtatgaacccaatggatcttaagcgcggtatc
gacaaagctgttgcagcggcagtagagcaactaaaagagctttctgttgagtgtaacgac
accaaagcaatcgcacaggttggtactatctctgcgaactctgacgcaagcgtaggtaac
atcattgctgaagcaatggaacgcgttggccgcgacggtgttatcactgttgaagaaggt
caggctctacaagacgagctagacgtagtagaaggtatgcagttcgaccgcggttaccta
tctccttacttcatcaacaaccaagaagcgggcagcgttgagctagaaaacccattcatc
cttctagttgataagaagatctcaaacatccgtgagcttctaccaactctagaagcagta
gcaaaagcatctcgtccactgctaatcatcgcagaagacgtagaaggcgaagcactagcg
acattggttgtgaacaacatgcgtggcatcgtgaaagttgctgcggttaaagcgcctggt
tttggtgaccgtcgtaaagcaatgctacaagacatcgctatcctgactggcggtactgtg
atttctgaagaaatcggtctagaactagaaaaagtaacgcttgaagatctaggtcaggct
aagcgcgtaagcatcacgaaagaaaactcaaccatcatcgatggtgcgggtgaagaagcg
atgatccaaggccgcgttgctcaaattcgtcaacaaatcgaagacgcaacttcagactac
gacaaagagaaactacaagagcgcgttgctaaactggctggcggtgttgcagtaatcaaa
gttggtgcagcgactgaagttgaaatgaaagagaaaaaagaccgcgtagaagacgcgcta
cacgcgactcgcgcagcggttgaagaaggcgtagttgctggtggtggtgttgcactaatc
cgcgctgcatctaagattgttgacctagaaggcgacaacgaagaacaaaacgttggtatc
cgcgttgcgctacgcgcaatggaagcaccaatccgtcaaatcacgaagaacgcaggtgac
gaagactctgttgttgcgaacaacgtgaaagcgggtgaaggttcttacggctacaacgca
gcgacgggtgaatacggcgacatgctagagatgggtatcctagacccaactaaagtaact
cgtagcgctctacaatttgcagcgtctgtcgctggtctaatgatcacaacagaagcgatg
gtaactgacctaccacaaaaagaaagtgcaggcatgcctgacatgggtggtatgggcggt
atgggtggcatgggcatgatgtaa
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