Vibrio parahaemolyticus BB22OP: VPBB_2816
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Entry
VPBB_2816 CDS
T02409
Name
(GenBank) GGDEF & EAL family protein with FIST domain
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VPBB_2816
Enzymes [BR:
vpb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VPBB_2816
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
HIND
Motif
Other DBs
NCBI-ProteinID:
AGB11264
LinkDB
All DBs
Position
1:complement(3160320..3162740)
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AA seq
806 aa
AA seq
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MHPDKQYLVQILSTQSRECAVALAKAVLSMLPNAHVIGHSTRNVILDGDIFTSGCLINLI
EFDQTTLTSAVQAYSFSPDIDGGELKRSLQLQSNSQVIISFAVQIERRDYPLYQTFATEN
VRVSGGLAQTIEDGCWVLYQNQTYDNAVVAVALHSDTLKTWTDAYSEWNPIGMPHKVTHA
KGTRLYCLGERKALDVYKHYLADGHDVTINQLLSFPLYRETLGRKEVCTVTELHADGSMS
FDRPWCLGDEVQFCYNHPSLTLEQVRHGVVELAMHQPEVVMIYNCASRLDFIDSSDEVQA
FMDIAATFGSYCMGEIHGDIGQPEILHHSLTYLAMREGDEVQSLNLPKPLVSASISPLFS
LIRNAIGDLNHMNAHMGYQLDRQTRKLQESYRRDSRTGLQNRVALQERLSHIDCDEHLLT
LKLLNFSHINEKYGYRVGDQLLKDLSMHFTNRLRKRLGMPAALQLYSIGVGEWAFVFKAE
QSSETIKQHFTRFADAVEQTNFEPLGLREIDYLSISLCGGLVSRRDFPSASPDELLLKGI
EARRSGVRSNTHICNAKDIEVSEDVRKEQLGWLSCVSRAILKQNIITYSQPIVHAYSHLP
ASQECLVRILEEDGTVIAPGRFLPIISDTHLYTRLSRHMIRSTLHYMRDKKGDFSINLSP
QDLLSDKTLMLLEHEISQLNDSTRIGLEVLESEQIKDYGRMIEVCSHFRKLGARIIVDDF
GSGYSNIDEILKLEPEVIKLDGSLIRDIDKDLKQRKIASQLVRLCQVFNAETVAEFVHNR
EVCKIAQDMGVDYLQGYYLGEPTRLF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
ttgcacccagataaacagtatttggtgcaaattttgtctacgcaatcacgagaatgtgcg
gttgcactcgccaaagcggttttgtcgatgttgcccaatgctcatgtcatcggccacagc
actcgcaatgtaattttggatggcgacatttttacctctggctgcctcatcaacctgatt
gagtttgaccaaaccacactaacgtctgccgtccaagcgtattctttctctcccgatata
gacggtggcgagctcaaacgttcgctgcagttacaaagcaactctcaagtcatcatcagt
tttgccgtgcaaatcgaacgtcgtgattatcctttgtatcaaacttttgcgaccgaaaac
gtgcgagtgtctggtggattagcgcaaaccatagaagacggctgttgggtgctctatcaa
aaccagacatacgacaacgccgtagtggcagtggctttgcacagtgatactttgaaaact
tggacagacgcgtattccgagtggaacccaatcggcatgccgcacaaagtgacgcacgcg
aaaggcacgcgcttgtattgcttaggagagcgtaaagccctcgatgtttataagcattat
cttgccgacgggcacgacgtgacgattaaccaattactcagtttcccgttgtatcgagaa
acgttggggcgtaaggaagtttgtaccgtcacagaacttcacgccgatggaagcatgagt
ttcgataggccgtggtgcctcggtgatgaggttcagttttgctataaccatccctctctg
acgttagaacaagtgcgtcatggggtggtggaacttgccatgcatcagcctgaagtagtg
atgatttacaactgtgcctcgcggttggattttattgatagcagcgatgaagtgcaggcg
tttatggatattgccgcgacctttggcagctactgcatgggtgaaatacatggtgacatt
ggccagccagaaattcttcaccacagtttgacgtaccttgcgatgcgcgaaggcgatgag
gtgcaatcgctgaatttgcctaaaccgctagtgagcgcttcgatttcaccgctgtttagc
ttaatacgcaatgcgattggcgatttgaatcatatgaacgctcacatgggttatcaactt
gatcgtcaaactcgcaagttacaagaaagctaccgtcgtgacagtcgcacggggctgcaa
aatcgcgtggcgctgcaagagcgcttaagtcacatcgattgtgacgagcatttgttaacg
cttaagctactcaatttcagccacatcaacgaaaagtacgggtatcgagtcggagaccag
ctgctcaaagatctgtcgatgcattttaccaatcgattgagaaagcgcttaggcatgcca
gcggcgctgcaactgtacagcattggtgtaggtgagtgggcttttgtgtttaaggctgaa
caaagtagcgagactatcaaacagcactttactcgttttgctgatgcggttgagcaaact
aactttgagccgctcggcctgcgcgaaattgattacttgtctatttccttgtgtggtggc
ttggttagccgtcgtgattttccttcggcttctcctgatgagctcttattaaaaggtata
gaagcgcgtcgttctggcgttcgcagcaacacgcatatttgcaacgctaaagacatcgaa
gtcagtgaagatgtacgtaaagagcaactagggtggttgagttgtgtcagccgcgcgatt
ctcaagcagaacatcattacgtatagccaaccgattgtgcacgcttacagtcatcttcct
gccagccaagaatgtctggtgcggattttagaagaagatggaacagtgattgcgccgggg
cgatttttaccgatcatctcagacacgcatttgtacaccagattgagtcgtcacatgatc
cgctcgacgctgcattacatgcgagataagaaaggggatttctcgattaacttgtctccg
caagatttgttgagcgacaaaacgttgatgttgctggagcatgaaatcagccagttgaat
gactcgacgcggatagggctggaagtgctggagtctgaacagattaaagattacggtcgt
atgatagaagtgtgtagccatttcagaaaactgggtgcgcgcattatcgtggacgatttt
ggttctggatactccaatattgatgagatcttaaagctagagccggaagtgataaagctg
gatggcagcttgattcgagacatcgataaggatttaaagcagcgcaaaatagcttctcag
ttggtgcgtttgtgccaggtgtttaatgcagaaacggtcgcggagtttgtgcacaatcga
gaggtgtgcaaaatcgcgcaggatatgggcgtcgattatctgcaaggctactacttaggt
gaacctacgcgtctgttttag
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