Vibrio parahaemolyticus BB22OP: VPBB_2820
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Entry
VPBB_2820 CDS
T02409
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00300
Lysine biosynthesis
vpb00470
D-Amino acid metabolism
vpb01100
Metabolic pathways
vpb01110
Biosynthesis of secondary metabolites
vpb01120
Microbial metabolism in diverse environments
vpb01230
Biosynthesis of amino acids
Module
vpb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VPBB_2820
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VPBB_2820
Enzymes [BR:
vpb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VPBB_2820
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGB11268
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Position
1:complement(3165294..3166124)
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNVFFSQDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRLKGLTNKYSISVSTKKGKMILDVEDDGEVTVNM
GVPEFEPNKIPFKAKQKEKTYIMRAGDKTLFCGAVSMGNPHVVTVVDDVDTADVDTLGPL
LESHERFPERVNAGFMQVVSRDHIRLRVYERGAGETQACGSGACGAVAVGILQGLLDESV
KVSLPGGELHISWQGPGKPLFMTGPATHVFDGQLSC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccacttttccaaaatgcacggtttgggcaacgacttcatggtcgtcgactgc
attacccagaacgtgtttttctcgcaagacttgatccgtcgtttggcggatcgtcacact
ggcgtcggttttgaccaattgctcgtggtagaagcaccttatgatcctgaaaccgacttc
cactatcgcatttttaatgccgatggcagtgaagtggagcaatgcggcaacggcgcgcgc
tgtttcgcgcgttttgttcgtttgaaagggttgaccaataaatacagcatcagcgtgagc
accaagaaaggtaagatgattcttgatgttgaagacgacggtgaagtgacggtcaacatg
ggtgtgccagagtttgaaccgaacaaaattccgttcaaagcgaagcagaaagaaaaaacc
tacatcatgcgcgcgggtgacaagacgctgttttgtggtgccgtcagcatgggtaaccca
catgtggtgacagtagtggatgacgtggataccgcagatgtggacactctaggtccgctg
cttgaatcacacgaacgcttccctgaacgtgtgaacgctggctttatgcaagtggtgagt
cgtgaccacattcgtcttcgagtttacgagcgcggcgcaggtgaaacacaagcttgtggt
agcggcgcatgtggcgcggtggctgtgggtattttgcaaggacttttggatgagagtgtg
aaagtatcgctacctggtggtgagctgcatatttcttggcaaggcccgggcaaaccactc
tttatgacaggccctgctactcacgtatttgatggtcaactgtcgtgctag
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