Vibrio parahaemolyticus BB22OP: VPBB_A0079
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Entry
VPBB_A0079 CDS
T02409
Name
(GenBank) Exopolygalacturonate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00040
Pentose and glucuronate interconversions
vpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VPBB_A0079
Enzymes [BR:
vpb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
VPBB_A0079
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
FTP
Glucodextran_B
TcfC
Motif
Other DBs
NCBI-ProteinID:
AGB11453
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All DBs
Position
2:76653..78881
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AA seq
742 aa
AA seq
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MKKHTLALCLAAILAPAAHAAEIKVEDLTWKAITFGQSTDMNFGSTILPEKVGVNQVTFN
GEAVAAGKLASTFTIESRGGKLANSHEGLTFYYTELPTDVNFTLSADVVLEQLGPETGAT
PNRQEGAGLMVRDILGAERLVPQPEGHEEFPSASNMVMNLMRSHTRTNDGMTNINASFRE
GVYQPWGTPGNRLSRVDYVEGVPYGTAETYRMTLTRTNDGFKVSYRNGEKFVEQAVKGAN
ANIVEMQNSDSQYVGFFASRNAKMTVSNVDLQLAAADTVDAPKYAAKQGELVFQIASSPR
SATKEYPVQARANYSGEFEVLHNGKVVAKQTVTAGELFSQWLTLDSGANQMEVRFTAIDG
PNKETQAHRYSVDVVSLPDPMTLYVAPNGSDKGNGSQAQPLDFATAVELLPAGGTIILKD
GDYQGMEIPLTASGSADKLKHLRAEGDNVRFVSELRHEANYWHYQGIEVAGAQFIVHGSH
NTFEKMVTHGAPDTGFVITSPENIGRALWASYNQVIESESYNNMDPSQINADGFAAKMRI
GDGNTFIRCLSHHNIDDGWDLFNKVEDGANGAVTILDSISFSNGRTLDVANKGGTIGNGF
KLGGEGIPVPHVVKNSLSFNNNMDGFTDNFNPGALVLSDNVSIDNKRFNYLFRKSPYSGE
IEQGTFTNNRSYRFHVSSKYDDVINSAKSTGNALVENGTTYTSDGKAVDSKTLAPLKQAS
VIDTQQAIPGKQEAMQLKQLIH
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacactttagccttgtgtctggcggccatattggccccagccgcacacgct
gctgagattaaggtcgaagacctgacttggaaagcgatcacttttggtcaatcgaccgac
atgaactttggctcaaccattttgccggaaaaagtcggcgtgaaccaagtgacgttcaat
ggtgaggctgtcgctgctggcaagttagcgtccacatttaccattgaaagccgcggcggc
aagttagctaactcgcatgaaggactcaccttttactacaccgagctaccaaccgatgtg
aactttaccctcagtgccgatgtggtgcttgaacagcttggcccggaaacaggcgcgaca
cccaaccgccaagaaggcgcaggtttgatggtgcgcgacattctaggtgccgagcgttta
gtgccgcaacccgagggccatgaagagtttccgtctgcatcgaacatggtgatgaaccta
atgcgttctcacacccgcacgaacgatggcatgaccaacatcaacgcatcgtttcgtgaa
ggcgtttatcaaccttggggaacgccgggtaaccgtttaagccgtgtcgattatgtggaa
ggggtgccttacggcacggctgaaacctaccgcatgacgctgacacgcaccaatgatggt
ttcaaagtcagctaccgtaatggcgaaaaattcgttgagcaagcggtaaaaggcgcgaat
gccaatatcgttgaaatgcaaaactcagactcgcaatacgtcggcttctttgcgtcacgc
aatgcaaaaatgacggtgagcaatgtcgatttgcagcttgctgcggcggataccgtggac
gctccaaaatacgcggccaagcagggagaattggtattccaaatcgcttcttcacctcga
tctgcaaccaaggagtatccggttcaagctcgtgccaactactcgggcgaatttgaagtt
ctgcacaatggcaaagtggtagcgaagcaaaccgtgacggcgggcgagttgttcagccag
tggctgacacttgatagcggcgcgaatcaaatggaagtgagattcaccgccattgacggc
ccaaacaaagagacacaagcgcaccgttacagcgttgacgttgtttctctgccagaccca
atgacgctgtatgttgcaccaaacggcagcgacaaaggcaacggatctcaagcgcaaccg
cttgatttcgctaccgcagtagaactgcttcctgctggtggcaccatcattttgaaagat
ggcgactaccaagggatggaaatcccgctgacggcgagtggcagtgccgacaagctcaag
catctacgtgcggaaggagacaatgttcgctttgtttcggaacttcgtcacgaggcaaat
tactggcattaccaaggtattgaagttgcgggtgcgcagttcattgttcatggtagccac
aacaccttcgaaaaaatggtgacacacggcgcgccagatactggtttcgtgatcacctct
cctgaaaacattggccgcgcactatgggcaagttacaaccaagtgattgaaagcgaaagc
tacaacaacatggatccttcgcagatcaacgcagacggttttgcggccaagatgcgcatc
ggcgatggcaacactttcatccgttgtttgtctcaccacaacattgatgacggttgggac
ttgttcaacaaagtggaagatggcgcaaacggtgcggtgactattttggattccatctcg
ttcagcaacgggcgcacactcgatgttgccaacaaggggggcacgattggtaacggtttc
aagctaggcggcgaggggattccggttccacatgtggtgaaaaacagcctgtctttcaat
aacaacatggacggatttacggacaactttaaccctggtgcactggtattgagcgacaac
gtgtcgattgataataagcgcttcaactacttgttccgtaagagcccatattccggcgag
attgagcaaggcacgttcaccaataaccgttcttaccgattccacgtcagcagcaaatat
gacgacgtgatcaacagtgcgaaatcgactggcaatgcgttggtcgaaaatggcacgact
tacaccagtgatggcaaagcggtcgacagcaaaacgctcgcgccattaaagcaagcgtcg
gtgattgatacccaacaagccattccgggtaagcaagaggcgatgcagcttaagcaactt
attcactaa
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