KEGG   Vibrio parahaemolyticus BB22OP: VPBB_A0171
Entry
VPBB_A0171        CDS       T02409                                 
Name
(GenBank) Two component Sigma-54 Specific central transcriptional regulator of acidic amino acid uptake
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
vpb  Vibrio parahaemolyticus BB22OP
Pathway
vpb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VPBB_A0171
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vpb02022]
    VPBB_A0171
Two-component system [BR:vpb02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   VPBB_A0171
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 AAA_16 HTH_8 AAA FleQ BrxC_BrxD nSTAND6 MCM nSTAND1 DUF815
Other DBs
NCBI-ProteinID: AGB11545
LinkDB
Position
2:180500..181855
AA seq 451 aa
MAFESTPNIALIEDDDIVRQATSQWLQLAGFNVEAFSTGDAGKAAILSQDFDAVVSDVRL
PDSDGLSILESLIDHHIQTPVILITGHGDVDMAVSALQKGAFDFIEKPFQPERLSQRVTE
AVETYRAQTSTQDRQEYLASVSGLEEVLIGRSRVMQQLREQVAKLARIDTNVIIYGETGC
GKELVATSLHKESQRKLHRFVPINCGAIPENLFESELFGHEPGAFTGASKRRIGKLEYAD
KGTLFFDEIESMPLSMQVKVLRSLQEHTVERVGGNQQINVDLRVIAAAKEDLNDHEEFRQ
DLYYRLNVAQIYLPPLREREEDALILFEHFALQTNPDSRPLSDADRNAVLSYAWPGNVRE
LRNVAMRFALDDTVSVMEILSSRPSSTTEETQAGVPLMIQLHNFERKVLHDSLVRHQGRI
NEVMQELDLPRRTLNQKMQKFGLNRSDYTDS
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggcttttgaaagcacccccaacatcgcacttattgaagatgatgacattgttcgtcag
gcaactagccaatggctgcaactggccggatttaacgttgaggcattcagtaccggtgac
gctggaaaggcggcgatactaagtcaagactttgatgctgttgtcagcgatgttcgcttg
cctgatagcgatggtctctcgattttagaaagccttattgaccatcatatccaaacgccc
gttatcctgatcaccggacatggggatgtggatatggcggtgagtgcgttgcaaaagggc
gcatttgattttattgagaaaccatttcagccagagcgactctcgcaacgtgtgactgaa
gcggtcgagacttatcgagcgcagacgtcaacgcaagatcgtcaagaatatctcgcgagc
gtaagtgggctcgaggaagtgctgattggccgaagccgggtcatgcagcaattgcgtgaa
caagttgcaaagctagcgcgtattgatactaacgtcattatttatggtgaaacgggctgt
ggtaaagagctggtggctaccagcctgcataaagaaagccaacgaaaattacatcgtttc
gtaccgataaactgtggcgcgattcccgaaaatctgttcgaaagtgagctgtttggtcac
gagcccggcgcttttaccggagcaagtaaacgacggattggcaaactcgaatacgccgat
aaaggcacgctgttttttgatgaaatcgagagtatgccgctttcaatgcaagtgaaagtg
ctgcgctcattgcaagaacatactgtcgagcgagttggtggtaaccagcagatcaatgtg
gatttgcgagtgatcgctgccgcgaaagaagatctcaacgatcatgaagagttccgccaa
gatttgtattaccgacttaatgttgcacagatctacttgccgccgcttagggagcgagaa
gaagacgcgttgattctgtttgagcactttgcgttgcaaaccaatccagacagtcgaccg
ttgagtgatgccgacagaaatgccgtgctttcttacgcttggccaggaaatgtgcgcgaa
ttacgtaacgtcgcaatgcgtttcgcgctggatgatacggtttctgtgatggaaattctt
tctagccgcccgtcgtcaaccacggaagagactcaagcgggtgttccgttgatgattcag
ttgcacaactttgagcgcaaagtgttgcatgattcattagtgaggcaccaaggacggatt
aatgaagtgatgcaagagctcgatttaccacgccgcaccctaaatcagaaaatgcaaaaa
tttggtctgaatcgctccgattacaccgattcgtga

DBGET integrated database retrieval system