Vibrio parahaemolyticus BB22OP: VPBB_A0339
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Entry
VPBB_A0339 CDS
T02409
Name
(GenBank) ABC transporter periplasmic spermidine putrescine-binding protein PotD
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VPBB_A0339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpb02000
]
VPBB_A0339
Transporters [BR:
vpb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
VPBB_A0339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
PrpR_N
Motif
Other DBs
NCBI-ProteinID:
AGB11713
LinkDB
All DBs
Position
2:361438..362472
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AA seq
344 aa
AA seq
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MKLIIKGLGLSALVLSMFAHADSKTLNVYAWGGYLPEASLKAFEKQEGVTINYSTFENNE
SMYTKLKLLKGSGYDVVFASAYFIEKMGREGLLSKIDHAQVPNMQDTMDGLLGQAHDPKN
DYSLPYIWGITGISYNESMVEQPVTKWADLWESQYEQQVMLIDDVRDVFGMALKKNGHSV
NTKDEAEIKQAFDSLVALKNNVLLYNSDAPQVPYVSGETSVGMQWNGNAFQGQVEMPELK
FVMPEEGAVLWMDNFTIPSGSKNKALAHKFINFMYQSENQAEIVTSLGYASATNAGRDKL
PEELKNNRTIFPSSEDMKKGEFINDVGAETLAIYEKYWQRLRTQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaatcatcaaaggattggggctgagtgctcttgtgctcagcatgtttgctcat
gcagatagcaaaacgttgaacgtttatgcatggggtggctatttgccggaagcatcgtta
aaagcgtttgaaaaacaagaaggcgttacgattaattattcgacctttgagaataatgaa
tcaatgtacaccaagctaaaattgctaaaaggttctggttacgatgtggtttttgcttct
gcgtacttcattgaaaaaatgggtcgagaagggctgctttcgaaaatagatcacgctcaa
gtgccaaacatgcaagacacaatggacggcttactcggccaagcgcacgatccgaaaaat
gattactcattgccttatatttggggcattaccgggatcagctacaacgaatccatggtt
gagcaaccagtgacaaaatgggctgacttatgggagtcacaatacgaacaacaagtcatg
ctcattgatgacgttcgcgatgtgttcggtatggcgctgaagaaaaatggccatagcgtg
aacactaaagacgaagcagaaatcaaacaggctttcgattctttagtggcactgaaaaac
aacgtattgctgtacaactcagacgcacctcaagtcccttacgtgtccggtgaaacatcg
gtcggcatgcaatggaacggcaacgcattccaagggcaggttgaaatgcctgagctgaag
ttcgtgatgccggaagagggcgcggtattgtggatggacaacttcactattccgtctggc
agtaaaaacaaagcattggcgcataaatttattaactttatgtaccaatcagagaaccaa
gcggaaatcgtgaccagtttgggttatgcgtcggcaacgaacgctgggcgtgacaaattg
ccagaagagttgaaaaacaaccgtactattttcccttcatcagaagacatgaaaaaaggc
gagtttattaatgatgttggcgcagaaacgttagcgatttacgaaaagtactggcaacgt
ttaagaacgcaataa
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