Vibrio parahaemolyticus BB22OP: VPBB_A0750
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Entry
VPBB_A0750 CDS
T02409
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00260
Glycine, serine and threonine metabolism
vpb00460
Cyanoamino acid metabolism
vpb00630
Glyoxylate and dicarboxylate metabolism
vpb00670
One carbon pool by folate
vpb00680
Methane metabolism
vpb01100
Metabolic pathways
vpb01110
Biosynthesis of secondary metabolites
vpb01120
Microbial metabolism in diverse environments
vpb01200
Carbon metabolism
vpb01230
Biosynthesis of amino acids
vpb01240
Biosynthesis of cofactors
vpb04981
Folate transport and metabolism
Module
vpb_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VPBB_A0750
09102 Energy metabolism
00680 Methane metabolism
VPBB_A0750
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VPBB_A0750
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VPBB_A0750
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VPBB_A0750
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VPBB_A0750
Enzymes [BR:
vpb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VPBB_A0750
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AGB12124
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Position
2:complement(830709..832004)
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AA seq
431 aa
AA seq
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MNKSYPNHSLENFFSTNLSATDDAVFAGIQAEFTRQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRETLEINYDDVRALALEHKPKM
IIAGGSAIPRTIDFAKFREIADEVNATLMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFKTYIDSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVNNPEGDAIVEKRVRKEV
KELCSRFPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagttaccctaaccacagcttggaaaactttttctctaccaacctctctgcg
acagatgacgctgtctttgccggaattcaggcggaattcactcgccaaaacgaacaaatc
gaacttatcgcttctgagaacatcgtgtctaaagcggtaatgcaagctcaaggcacatgc
ctaacaaacaaatacgctgaaggttatccaggtcgccgttactatggtggttgtgagcac
gtagatacagtggaagccattgctatcgaacgcgcgaaaaaactttttaattgcgaatac
gcaaacgttcaacctcactcaggcgctcaagcaaacggcgcagtgaaactggcactactt
caacctggcgacaccattcttggcatgtctttggacgcaggaggccacctaacacacggt
gcacgccctgcactctctggcaagtggtttaatgcagttcaatacggcgttgatcgtgaa
acactagaaatcaactacgatgatgttcgcgctctggcactagaacacaaaccaaagatg
atcatcgcaggcggtagcgcgattccacgtactatcgatttcgcaaagttccgtgaaatc
gccgacgaagtgaacgcaaccctaatggtcgatatggcgcacatcgcaggccttatcgca
acaggcgcacaccctagcccattgccacacgcacacgttgtgaccacgacaacgcacaaa
acactgcgtggcccacgcgggggcatgattctgactaaccacgaagacatcattaagaag
atcaattcggcggtattcccaggcctacaaggcggcccattaatgcacgttatcgccgct
aaagcggtcgcatttggtgaagcacttggccctgaatttaaaacttatattgattcggtg
atcaataacgcaaaagtcctagcggaagtattgcaaactcgcggttgcgacatcgtaact
ggtggtacagacacgcacttaatgctggttgaccttcgtcctaaaggcttgaaaggcaac
aaagcagaagaagctctagagcgtgctgggatcacatgtaacaaaaatggcatcccattc
gatacagagaagcctatgattacatcgggcatccgtttaggaacgcctgcgggtacaagc
cgcggctttggcgctgaagaattcaaactcatcggtaattggattggtgacgtactggac
ggtttggtgaacaacccagaaggtgacgcaatcgttgagaaacgcgttcgcaaagaagta
aaagagctttgcagtcgcttccctctttaccagtaa
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