KEGG   Vibrio parahaemolyticus BB22OP: VPBB_A0750
Entry
VPBB_A0750        CDS       T02409                                 
Name
(GenBank) Serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vpb  Vibrio parahaemolyticus BB22OP
Pathway
vpb00260  Glycine, serine and threonine metabolism
vpb00460  Cyanoamino acid metabolism
vpb00630  Glyoxylate and dicarboxylate metabolism
vpb00670  One carbon pool by folate
vpb00680  Methane metabolism
vpb01100  Metabolic pathways
vpb01110  Biosynthesis of secondary metabolites
vpb01120  Microbial metabolism in diverse environments
vpb01200  Carbon metabolism
vpb01230  Biosynthesis of amino acids
vpb01240  Biosynthesis of cofactors
vpb04981  Folate transport and metabolism
Module
vpb_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    VPBB_A0750
  09102 Energy metabolism
   00680 Methane metabolism
    VPBB_A0750
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VPBB_A0750
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    VPBB_A0750
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    VPBB_A0750
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    VPBB_A0750
Enzymes [BR:vpb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     VPBB_A0750
SSDB
Motif
Pfam: SHMT Aminotran_1_2 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: AGB12124
LinkDB
Position
2:complement(830709..832004)
AA seq 431 aa
MNKSYPNHSLENFFSTNLSATDDAVFAGIQAEFTRQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRETLEINYDDVRALALEHKPKM
IIAGGSAIPRTIDFAKFREIADEVNATLMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFKTYIDSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVNNPEGDAIVEKRVRKEV
KELCSRFPLYQ
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgaataagagttaccctaaccacagcttggaaaactttttctctaccaacctctctgcg
acagatgacgctgtctttgccggaattcaggcggaattcactcgccaaaacgaacaaatc
gaacttatcgcttctgagaacatcgtgtctaaagcggtaatgcaagctcaaggcacatgc
ctaacaaacaaatacgctgaaggttatccaggtcgccgttactatggtggttgtgagcac
gtagatacagtggaagccattgctatcgaacgcgcgaaaaaactttttaattgcgaatac
gcaaacgttcaacctcactcaggcgctcaagcaaacggcgcagtgaaactggcactactt
caacctggcgacaccattcttggcatgtctttggacgcaggaggccacctaacacacggt
gcacgccctgcactctctggcaagtggtttaatgcagttcaatacggcgttgatcgtgaa
acactagaaatcaactacgatgatgttcgcgctctggcactagaacacaaaccaaagatg
atcatcgcaggcggtagcgcgattccacgtactatcgatttcgcaaagttccgtgaaatc
gccgacgaagtgaacgcaaccctaatggtcgatatggcgcacatcgcaggccttatcgca
acaggcgcacaccctagcccattgccacacgcacacgttgtgaccacgacaacgcacaaa
acactgcgtggcccacgcgggggcatgattctgactaaccacgaagacatcattaagaag
atcaattcggcggtattcccaggcctacaaggcggcccattaatgcacgttatcgccgct
aaagcggtcgcatttggtgaagcacttggccctgaatttaaaacttatattgattcggtg
atcaataacgcaaaagtcctagcggaagtattgcaaactcgcggttgcgacatcgtaact
ggtggtacagacacgcacttaatgctggttgaccttcgtcctaaaggcttgaaaggcaac
aaagcagaagaagctctagagcgtgctgggatcacatgtaacaaaaatggcatcccattc
gatacagagaagcctatgattacatcgggcatccgtttaggaacgcctgcgggtacaagc
cgcggctttggcgctgaagaattcaaactcatcggtaattggattggtgacgtactggac
ggtttggtgaacaacccagaaggtgacgcaatcgttgagaaacgcgttcgcaaagaagta
aaagagctttgcagtcgcttccctctttaccagtaa

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