Vibrio parahaemolyticus BB22OP: VPBB_A0988
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Entry
VPBB_A0988 CDS
T02409
Name
(GenBank) Ribose ABC transport system periplasmic ribose-binding protein RbsB
KO
K10439
ribose transport system substrate-binding protein
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb02010
ABC transporters
vpb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VPBB_A0988
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
VPBB_A0988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpb02000
]
VPBB_A0988
Transporters [BR:
vpb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
VPBB_A0988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
PucR
ANF_receptor
FAD_binding_4
Porin_7
Motif
Other DBs
NCBI-ProteinID:
AGB12362
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All DBs
Position
2:complement(1112340..1113218)
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AA seq
292 aa
AA seq
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MKKLATLISAALLSSTVSVAAQAQDTMAIVVSTLNNPFFVTMKDGAEAKAKELGYDLIVL
DSQNDPSKELSNIEDLTIRGVKAILINPTDSDAVSNAIRMANRSNIPVFTLDRGASRGEV
VSHIASDNVVGGEMAGHYIMEKVGEKAKVIQLEGIAGTSAARERGEGFMTAVKGSDMELL
ASQPADFDRTKGLNVMENLLAANPDVQAVFAQNDEMALGALRAVQASGKNVMIVGFDGTE
DGIAAVNRGKLAATIAQQPDLIGALGVETADKVLKGEKVDEYIPVPLKVVTK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacttgcaactcttatctctgctgcacttctttcttccactgtatcagtagcg
gcgcaagcccaagatacgatggcgattgtggtttcgacgctaaacaacccgttcttcgta
acgatgaaagatggtgcggaagctaaagcgaaagaactgggatacgatttgattgtactg
gactcgcaaaatgacccgagcaaagaactgtcaaacatcgaagacctaaccattcgcggt
gtaaaagcgattttgatcaacccaacggattctgacgcagtgtctaatgcgattcgtatg
gcaaaccgttctaacatccctgtgttcactctagaccgtggtgcaagccgtggtgaagta
gtgagccacatcgcatctgacaacgttgtaggcggcgagatggctggccactacatcatg
gaaaaagttggcgagaaagcaaaagtgattcagctggaaggtattgctggtacgtctgcg
gctcgtgagcgtggtgaaggcttcatgaccgctgtgaagggaagcgatatggagcttctg
gctagccaaccggctgactttgaccgcacgaaaggtctaaacgtaatggaaaacctactg
gctgcgaacccggatgttcaagcggtgtttgcgcagaatgatgagatggctctaggtgca
ctacgcgcggttcaagcgtctggtaaaaacgtcatgatcgttgggtttgacggcacggaa
gatggcatcgcagcggttaaccgtggcaagctagcagcaaccatcgcacaacaacctgat
ctcatcggcgcgttaggcgttgaaacggctgacaaagtactgaaaggcgagaaagtggat
gagtacatcccagttcctctaaaagtggtaacaaaataa
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