Vibrio parahaemolyticus BB22OP: VPBB_A1031
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Entry
VPBB_A1031 CDS
T02409
Name
(GenBank) Methylcrotonyl-CoA carboxylase biotin-containing subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00280
Valine, leucine and isoleucine degradation
vpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VPBB_A1031
Enzymes [BR:
vpb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
VPBB_A1031
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
ATP-grasp_3
BT_MCC_alpha
HlyD_D23
NQRA_N
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
AGB12405
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Position
2:1160640..1162715
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AA seq
691 aa
AA seq
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MFKRILIANRGEIACRIIKTAKSMAIETVAVYSEADRSSLHVKQADFAEFIGPAPASESY
LYIDAIIGAAKKWQADAIHPGYGFLSENPKLAKACSENGIVFIGPSTSAIEAMGSKSQAK
AIMSEANVPLVPGYHGTNNSVEHLLTEAEKIGYPVMLKATQGGGGKGMRVVNSAAEMPLA
IDGAQREALSSFGDKQLLVEKCILQPRHVEVQVFADQHGHCVYLSDRDCSIQRRHQKVVE
EAPAPGLSDELRKQMGEAAVQAAQAIDYVGAGTVEFLLDSRGQFYFMEMNTRLQVEHPVT
ELITGVDLVEWQFKVAAGEHLPISQSEITHNGHSIELRIYAEDASNDFMPSTGRIDYLHE
PTSDNDVRLAFVRVDSGVTQGDTISEYYDPMISKLIVWGQTRDIALKQLKQALTQYHVRG
VTTNIGYLYSIVSQPAFAEIELDTGFLVTHQQGISEQQSVSDSIWLTLATVARWNVLTSR
SGSSTLPTPTKQGFRLSVNNVYRFNFTDANANHQVHLHYSSQEYSSQQSCTKHPEPFTIE
CGEERHQVTLLENDNPFIVDIDNVRYIFNALSDEHQTTLFYLGQQRTFAHQPSFESPKGK
DDELSPTAPLNGVISAVMVNKGDKVAAGDPLLVLEAMKMEYTITAPVAATVDEVFYQHGD
QVQHGSILLHLISAPDNVCEDQEHEYATSEG
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagaatactgatcgcaaaccgcggtgaaattgcttgccgaatcattaaaacc
gcaaaaagcatggctatagagacggttgccgtctattccgaagcggatcgcagcagctta
catgttaaacaagcggatttcgccgagtttatcggccctgctccggcgagtgagtcgtac
ctctatatcgatgcgattatcggcgctgcgaaaaaatggcaagccgatgctatccaccct
gggtatggttttctttccgagaacccgaagctggcgaaagcgtgcagcgaaaatggcatt
gtttttattggcccttccaccagcgcaattgaagcaatgggttcgaagtcgcaagccaaa
gccattatgtcagaggcgaacgtacctttggttccgggctatcacggcacaaacaacagc
gttgagcatttattaacggaagcggaaaaaatcggttacccagtgatgcttaaagcaacc
caagggggcggcggtaaaggcatgcgagtggtcaacagcgcagccgaaatgccgttggcc
atcgacggtgcgcagcgtgaagcgctttcaagctttggcgataagcagcttcttgtcgaa
aaatgcatattgcagcctcgccacgttgaagtgcaggtgtttgctgaccaacatggccac
tgtgtttatctgtctgatcgcgattgttccattcaacgtcgtcaccaaaaagttgtggaa
gaagcacctgcccccggtcttagtgatgaactgcgaaaacaaatgggtgaagccgcagtt
caggccgctcaagcgatcgattatgttggcgctggtacggttgagttcttgctcgatagc
cgaggtcaattctacttcatggagatgaatacccgccttcaagttgaacaccctgtcacc
gaattgatcaccggcgttgatttggtggaatggcaattcaaagttgcggctggtgagcat
ttacctatttcgcaatccgaaatcacccataacggacactcaatcgagctgcgaatttac
gccgaagatgccagcaacgactttatgccgtcaactggccgaattgattacttgcatgag
cccacttcagacaacgatgtgcgcttagcgtttgtgcgcgttgatagtggtgttacccaa
ggcgataccatcagcgaatactacgatccgatgatcagcaaactgatcgtctggggtcaa
actcgtgatatcgccctaaaacagcttaaacaggcgttaactcaatatcacgtgcgtgga
gtgacgacaaacattggttatctgtacagcattgtttcgcagccagcctttgccgagatt
gagcttgatacaggtttcctagtcacacaccaacaaggcataagtgagcagcaaagtgtg
tcggattcgatctggttaacgttggcgaccgttgctcgctggaatgttctcacttcgaga
tcaggcagctcaacgttacccacgccaaccaaacaaggttttagactgtcggttaacaat
gtttaccgatttaacttcacggatgccaatgccaaccatcaagtacatttgcattattcg
tctcaagagtactcgtctcagcaatcatgcactaaacatcccgagcccttcactatcgaa
tgtggcgaagaacgacatcaggtgacactgcttgaaaatgacaacccgtttatcgtcgat
atcgataatgtgcgttatatctttaatgcgcttagcgacgagcaccagacaacgctgttt
tatcttggtcagcaacgtacgttcgctcatcaaccaagttttgaatcaccaaaaggcaaa
gacgacgaacttagtccaaccgcaccactgaacggcgtgatctcggcggtcatggtaaat
aagggagacaaagtagcggctggcgatccgctgttagtactcgaagcgatgaagatggaa
tacaccattaccgctccggtagcagcgaccgttgatgaagtgttttatcaacatggagac
caagtacagcacggttccatcctgctgcatttaatttctgcacccgataatgtctgtgaa
gatcaggagcacgaatatgctaccagcgaaggttaa
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