Vibrio parahaemolyticus BB22OP: VPBB_A1091
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Entry
VPBB_A1091 CDS
T02409
Name
(GenBank) dCMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00240
Pyrimidine metabolism
vpb01100
Metabolic pathways
vpb01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VPBB_A1091
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpb02044
]
VPBB_A1091
Enzymes [BR:
vpb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
VPBB_A1091
Secretion system [BR:
vpb02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
VPBB_A1091
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AGB12465
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All DBs
Position
2:1233819..1234283
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AA seq
154 aa
AA seq
DB search
MISKWAKRFYQMAELVASWSKDPSTQVGAVITKQNRIVSVGFNGYPHGVSDSVDTDEREL
KYLKTLHAEENAILFSKRDLDGCDIWVTHFPCPNCAAKIIQTGISRVHCPEQSEDFLSRW
GDKIQVSQDMFDQAGVEVDWLPLDDINFEDKDVR
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgatttctaaatgggcgaaacgtttttaccaaatggctgaactggtggcgtcttggagt
aaagacccttcaacgcaggtaggtgcggtgatcactaaacagaaccgcattgtttctgtt
ggctttaacggttatccacacggtgtttcggacagcgtagacaccgacgaacgtgaactg
aaatacttaaaaactctgcatgcagaagagaatgcaattctcttttcaaaacgcgatttg
gatggttgtgacatttgggtaacgcacttcccgtgcccgaactgcgcggcaaagatcatt
caaacaggtatttcgcgcgttcactgcccagaacagtctgaagactttctatctcgctgg
ggagataaaatccaagtgagccaagatatgtttgatcaggcgggtgttgaggtagattgg
ctaccgctagacgacatcaatttcgaggataaagacgttcgttag
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