KEGG   Vibrio parahaemolyticus BB22OP: VPBB_A1232
Entry
VPBB_A1232        CDS       T02409                                 
Name
(GenBank) T3SS2 inner membrane channel protein (LcrD HrcV EscV SsaV)
  KO
K03230  type III secretion protein V
Organism
vpb  Vibrio parahaemolyticus BB22OP
Pathway
vpb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vpb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VPBB_A1232
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpb02044]
    VPBB_A1232
Secretion system [BR:vpb02044]
 Type III secretion system
  Type III secretion core apparatus
   VPBB_A1232
SSDB
Motif
Pfam: FHIPEP
Other DBs
NCBI-ProteinID: AGB12606
LinkDB
Position
2:complement(1366435..1368318)
AA seq 627 aa
MMAKLRKSSLLFNPSSVMIAFLLPTIILVTLPGIVIDFFLMISFISSALLLVIMLENDEP
LKVTFLPTMVLLLTTFRLLLSIATTRNIIANEDVGQVIETVGQFVMGGNLLSGLLIFIII
TIVQFLVVTKGGERVAEVGARFSLDALPGKQMTIDGDLKSGLITGEQAQKLRADLGTENR
LFGSLDGAMKFVKGDAIAGILISLVNLFGGIYVGINQFDLSLGDSVSRFSVLTVGDGLVS
QIPSLLLSMACGVYLTRIKGSDDESSSFMSQLMLQIRTFWKSLFVIGGIIIVLGIANPNL
LYVCLPLAGVCAAIAIWLQKKDGSKNPTLSLEPQGHGLFQSLKFVFREEQYQHLIQRHVE
EKEKSLWGQALGLPAVVVDPTLDCDIKVYISDIEMYSYKNTEPGVVIEILNDELLMSSHD
VVSNINHIISYFIHNRFVEKYNLQYSSNIVTGLEQQSEIMKSEIDSAVGLNRVHDVLKQM
IRSPEFYLDRVSFFEALIYWSRVESDPRNWLTRMRSQARYDITSKLLNSEGKFNVILLTP
ELTEEISGFVAGEFDDAERLISVQTTLRSEIKRLLFQYGSKPVVVVNENELDYIKSFFQQ
VMSRIFVCSHADIVNSNCIENTDTIHI
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgatggcgaagttacgtaaatcatcattattgtttaatcccagcagtgtgatgattgcg
tttttattaccgacaatcattctagtgacgctgccggggattgtgatcgatttctttttg
atgatcagttttatcagttctgcactgttattggtcattatgttagaaaatgatgagccg
ttgaaagtgacgtttctacctacaatggttctcttactaacaacgtttcgtttgttgctt
tctattgcgacaacgcggaacatcattgctaatgaagatgttggtcaagttattgaaacg
gttggtcagtttgttatggggggaaacttactctctgggctgctgattttcatcatcatt
actattgttcaatttttagtagtaaccaaaggtggtgaacgcgttgctgaagttggtgct
cgcttctctctggatgcgttgcctggtaaacaaatgaccattgatggggatttaaaaagc
ggcttaatcaccggggagcaagctcaaaaattacgtgctgatttagggacagaaaacaga
ctttttggttctcttgatggggcaatgaagtttgttaaaggtgatgcgatcgcgggtatt
ttgatcagtttagttaacttattcggcggtatttatgttggtattaaccagtttgaccta
tctttaggagatagcgttagccgcttttcagtcttgacagtaggggatgggttagtatct
caaataccaagtttattgctatctatggcatgtggtgtctatttgacacgtattaaaggt
tctgatgatgagtctagctcatttatgtctcaactaatgttgcaaattcgaactttttgg
aaaagtttgtttgtcattggtggcatcattattgtcttgggtattgctaatccgaatttg
ttgtatgtgtgcttgcctctcgcaggggtttgtgccgctatagcgatttggctacaaaaa
aaagacggcagtaaaaatccaaccctcagtttagaaccgcaaggacatggcttatttcag
tctttaaagtttgttttccgagaagagcaatatcagcacttgattcaacgacatgtggaa
gagaaagaaaagtcgttatggggacaagcccttggactacctgcagttgtcgtagaccca
acgcttgattgcgatatcaaggtgtacatttccgatatcgaaatgtacagctataaaaat
actgaaccaggtgtagtgattgaaattcttaatgatgagcttttgatgtcaagtcatgat
gtggtgagtaatattaatcatattataagctactttattcataatcgttttgttgaaaaa
tataacctgcaatacagcagcaatattgtcacaggtttagaacaacaaagtgaaattatg
aaaagcgagattgattctgctgtcggattaaaccgagtgcatgatgtactgaagcagatg
attcgctcacctgagttttatttggatcgtgttagttttttcgaggctcttatctattgg
tcacgcgtagagagtgaccctcgtaactggttaacacgcatgcgtagtcaagcccgttat
gacattacaagcaaattgttaaatagcgaaggtaagtttaatgtcatattactgactccc
gaacttacagaagaaatttccggatttgttgctggtgagtttgacgatgctgagagattg
atttcggtacaaactacactgcgtagcgaaataaaacgtttgctttttcaatacggttcg
aaacctgtcgtcgtggtcaatgaaaatgaactggattatataaaatcatttttccaacaa
gttatgagtagaatatttgtatgtagtcatgctgatattgttaactcaaactgtattgaa
aatacagatacaattcatatttaa

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