Vibrio parahaemolyticus BB22OP: VPBB_A1344
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Entry
VPBB_A1344 CDS
T02409
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpb03400
]
VPBB_A1344
Enzymes [BR:
vpb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VPBB_A1344
DNA repair and recombination proteins [BR:
vpb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VPBB_A1344
Prokaryotic type
VPBB_A1344
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGB12718
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All DBs
Position
2:complement(1511096..1512511)
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AA seq
471 aa
AA seq
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MILVWFRRDLRTLDHTALKAALDTGQPVVACFIATPEQWQEHHMAPMQADLIARRLEHVH
QELTELNIPLLYKEVPRFDDCTKVICDWADKLNATAAMVNINYEVNEVELDRKVSQALDN
RGVEFHAFHDKCVHAPTTILNKQGEYFKVFTPFKRAWLQKFSLPTVSKPQKQNELPSEQL
AAVKQDGFDADFTFSYPRESSEAWCASTNDILKQLRTFARERSDGYQMKRDFPAIDGTSQ
LSPYLAIGALSPRQCIARLYAENPQPDLSEGKATWLSEIIWREFYQHLLVFEPKLVKGRG
FIDWEDKIQWSYDEQAFECWKTGTTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLH
IDWRWGEEYFMSKLVDGDFAANNGGWQWSASTGCDGQPYFRIFNPISQGEKFDSDGQFVR
HWVPEIKSVPNKFVHKPWTWEGFSLLEYHKPMVDHKVEREITLRLFKSAKE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgattctggtttggtttaggcgcgatttacgcacgttagaccacacggcgttaaaggcg
gcacttgatacagggcaacctgttgttgcttgttttattgcaacgccagaacagtggcaa
gagcaccacatggcgccgatgcaggcggatttaatcgctaggcgtcttgagcatgttcat
caagagctcacagagctaaacattcctcttctatataaagaagttccgcgtttcgatgac
tgtacaaaagtcatttgcgattgggcggataagctcaacgcaacagcggcaatggtcaac
atcaattatgaagtgaatgaagttgagttggatagaaaggtatctcaagcactggataat
cgtggggtagagtttcacgcctttcacgacaaatgcgttcatgcgccaacgaccatactc
aacaagcaaggtgagtatttcaaagtatttacgccattcaaacgagcatggttgcaaaag
ttttccttgccaacggtatccaagcctcagaaacaaaatgaactgcctagtgagcagtta
gcagcggtaaaacaagacggttttgatgccgattttacgttctcttatccgagggaatcg
agcgaagcttggtgtgcatcgaccaacgatattctcaagcaattgaggacgtttgcacgc
gagcgtagtgacggttaccagatgaagcgagatttccccgcaatcgatggtacgagtcag
ctctcgccttatcttgccatcggagcattgtcgccaagacagtgcatcgcgaggttgtat
gctgagaatccacaaccagatttgtcagaaggcaaagcaacgtggctgagcgagatcatt
tggcgtgagttctaccagcacttattggtgtttgaacctaaacttgtcaaaggtcgcgga
tttatcgactgggaagataaaattcaatggtcttacgatgaacaagcttttgaatgttgg
aaaacggggacgactggatatccaattgttgatgcggcaatgcgtcaactcaaccaaact
ggctggatgcataaccgacttcgcatgattgtcgcgagctttcttaccaaggatttacat
atcgactggcgctggggcgaagaatactttatgagcaagctcgtcgacggcgactttgcg
gcaaataatggtgggtggcagtggtcggcatcgactggctgtgatggccaaccatacttc
cgtatcttcaatccaataagccaaggcgagaagttcgattccgacggtcagttcgtgcgt
cattgggtgccagaaattaagagtgtgccgaataagttcgtccataaaccatggacttgg
gagggattttctttactggaatatcacaagccgatggttgatcacaaggttgaaagagag
ataaccttacggctctttaaaagtgccaaggaatag
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