Vibrio parahaemolyticus BB22OP: VPBB_A1499
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Entry
VPBB_A1499 CDS
T02409
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00330
Arginine and proline metabolism
vpb00480
Glutathione metabolism
vpb01100
Metabolic pathways
vpb01110
Biosynthesis of secondary metabolites
vpb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VPBB_A1499
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VPBB_A1499
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
VPBB_A1499
Enzymes [BR:
vpb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
VPBB_A1499
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
AGB12873
LinkDB
All DBs
Position
2:complement(1677644..1679791)
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AA seq
715 aa
AA seq
DB search
MPEDFSLLAESLDEQFNRHLQPLEQVELTDVGAAIITSADIKAGLHKMISETGYGIPVFL
VTDENPVSAEDYVWLTGVIDLERQSIEYYCRQINEAVTKYECRLLPPFFKQLTHYVEMGN
SAFDCPGHQGGQFFKKHPAGKQFYDFFGENLFRSDLCNADVDLGDLLIHEGSAHQAQAHA
AKVFNADKTYFVLNGTSASNKVVCNALVTEGDLVLFDRNNHKSNHHGALIQAGGMPVYLE
TARNPWGFIGGMDEHCFDEEYIRAQIAKVDPERARDERPFRLAIIQLGTYDGTIYNARYV
MDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDAGVIVTQSVHKQQAGFSQT
SQIHKKDRHIKGQARYCNHKRFNNAFMMHASTSPFYALFSALDVNAKIHDGEAGLRLWRD
AVKTGIEARKEILKSCELIRPFIPDEVEGQPWGSYDTDVIATNKKFFMFEPNASWHKFEG
YGEGQYFVDPCKLLLTTAGIAEDGSYADFGIPATLLANFLRENGIIPEKCDLNSILFLLT
PAEDMGKIRHLVAQINRFEKFIRDDAPLSIVLPSVYEANKERYRGYTIRQLCQEMHDMYK
ELNVKQLQKAMFRSEYFPQMVHKPDVATRKYFRGECDYLPLKEAVGRVAAEGALPYPPGI
ICVITGEIWTPHVVDYFLSLEEGINRFPGFAPEIQGVYLEDVNGRTTAHCYVLKD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagacttcagtttattagctgaatctttagatgaacaatttaatcgtcattta
caacctttagagcaagttgaattaaccgacgttggtgcggctattattacttcagcagac
attaaagcaggtctgcataaaatgatttctgaaacgggttacggtattccagttttctta
gtaacggatgaaaacccagtttcggcagaagattatgtttggctaactggcgttatcgat
ttagaaagacaatctattgagtactactgtcgtcaaatcaacgaagcggtaaccaagtac
gaatgtcgtctgcttcctcctttcttcaagcaattaacgcactatgttgagatgggtaac
tcagcgtttgactgtccgggacaccaaggtggtcagttcttcaaaaaacacccagctggt
aaacaattctacgatttcttcggcgaaaacctgttccgtagtgacttgtgtaacgcggac
gtggatttaggtgacttgctgatccacgaaggttctgcacaccaagcgcaagcgcacgct
gcaaaagtatttaacgcggacaaaacttacttcgtactcaacggtacttctgcttcaaac
aaagtggtgtgtaacgcgctagtaactgaaggtgatttggtactgttcgaccgtaacaac
cacaaatcgaaccaccacggtgcgttaatccaagcgggaggtatgccagtttacttagaa
acggcgcgtaacccttggggcttcatcggtggtatggatgagcactgtttcgatgaagaa
tacattcgtgctcaaatcgcgaaagtggatccagaacgtgcacgcgatgaacgtcctttc
cgtcttgctattatccagcttggtacttacgacggtactatctacaacgctcgctacgtg
atggataagatcggtcatctttgtgactacatcctgtttgactctgcgtgggttggttat
gagcagttcatccctatgatgaaagactgttcaccactgctgttggatttgaaaccagaa
gacgcaggtgtgatcgtgactcagtctgttcacaaacaacaagctggtttctctcaaaca
tcgcaaatccacaaaaaagaccgccatatcaaaggtcaagctcgttactgtaaccacaaa
cgctttaacaacgcgtttatgatgcacgcatcgacttcaccattctacgcactgttctct
gcgcttgatgtgaacgcgaagatccacgacggcgaagccggtctgcgtttatggcgcgat
gcggttaagactggtatcgaagcgcgtaaagaaatccttaagagttgtgaattgattcgt
ccgttcattccagacgaagtcgaaggtcaaccttggggcagctacgacactgacgtgatc
gccacgaacaagaaattcttcatgtttgagccaaacgcaagctggcacaaatttgaaggt
tacggtgaaggtcaatacttcgttgacccatgtaaattgttgctaactactgcgggtatt
gcagaagacggcagctacgcagatttcggtattcctgcaacgctattggcgaacttcctt
cgtgaaaacggcatcatccctgagaagtgtgacttgaactctatcttgttcctactcact
cctgcggaagatatgggtaagatccgtcaccttgtggctcaaattaaccgattcgaaaaa
ttcatccgtgatgatgcgcctctaagtatcgtacttccaagcgtctacgaagcgaataaa
gaacgctaccgtggctacaccatccgtcagctatgtcaggaaatgcatgacatgtacaaa
gagctgaacgtgaaacagctacaaaaagcgatgttccgcagcgagtacttcccacaaatg
gttcacaaaccagacgtggcaacacgcaaatacttccgtggtgaatgcgattacctacca
cttaaagaggccgttggtcgcgtagccgctgagggtgcacttccttaccctccaggcatc
atctgtgtgatcactggtgaaatctggaccccacacgtggtggattacttcctatctcta
gaggaaggcatcaaccgcttcccaggcttcgcgccagaaattcaaggtgtgtaccttgaa
gatgttaacggtcgcactaccgcacattgttatgtcctaaaagattaa
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