Vibrio parahaemolyticus BB22OP: VPBB_A1502
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Entry
VPBB_A1502 CDS
T02409
Name
(GenBank) Xanthosine operon regulatory protein XapR LysR family
KO
K01200
pullulanase [EC:
3.2.1.41
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00500
Starch and sucrose metabolism
vpb01100
Metabolic pathways
vpb01110
Biosynthesis of secondary metabolites
Module
vpb_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VPBB_A1502
Enzymes [BR:
vpb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.41 pullulanase
VPBB_A1502
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pullul_strch_C
Pullulanase_N2
PUD
CBM_48
X25_BaPul_like
Pullulanase_Ins
SusF_SusE
Alpha-amylase
AMPK1_CBM
SusG_CBM58
DUF4437
GlgB_N
Motif
Other DBs
NCBI-ProteinID:
AGB12876
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All DBs
Position
2:1683119..1687108
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AA seq
1329 aa
AA seq
DB search
MDNKTFKLSTIAKTVLPLISIAVISGCGSDSTSDDTTNPGSGLYPAGENEVVIYYKRDIA
SASTASDYEGWGLHLWNGEGCTSSDLEAMGIAGTGTDWSAPRPFDGINDTYGAYYVLKVN
PDASDPHECMNFILHKGDEKAFGSSNSKVELTKIGDSKGLFGFHGSSELYYEPIEERPVD
IDGQKAHWLDANTIAWEAAANADSMKLFYSLTNDIQMDEDKQISGGTAVELTKAGDLSDG
LKSRFRHLASLQAAGIDVDDATLRTILKSQIVMVAYNANGDVISATEVQKPGVLDAVFAD
SQAGNAISQELGAIVEGGAATFKLWAPTAQDVALIIYDENLKEETTVAMKEDSATGIWVS
EAQSNVVNKYYRYKVKVYHPTTGVIETRLVTDPYSLSLSKNSMYSQVIDLDDPSLMPQGW
SDYERPTVKKDEDHVLYESHLRDFSFNDTKGTKEYNGKYLALTEADRESVSHLQALKDAG
LTTLHILPAFDIATVDEEAANRVDITDTVGKLCGIKPEASVCDEVDGAKVIEDVLNSYDP
ATGSAQALMNDLRMLDSFNWGYDPFHYTVPEGSYATDPNGSKRILEFREMVQATHKMKLK
LIMDVVYNHTNASGINDKSVLDKIVPGYYHRLNVNTGGVENSTCCDNTATENLMMGKLMV
DSLKVWADDYKVDGFRFDLMGHQPKDVMVYALEQIRKIDENTLFYGEGWDFGEVSNNARF
DQATQLNMAGTEIGTFSDRLRDAVRGGSPFDGGVDSEGKHPLRFNQGFGNAAYANEETKV
DAESVNGRLHNQDLVRLGMAGNLADFVLLDYKGDTKLGKNVDYNGAPAGYTKVPSENISY
VSKHDNQTLWDNNAYKIATATPSADRARMQSVSLSTVMLGQGIPFIHMGSELLRSKSMQR
DSYDSGDWFNRVFFDGSDNNWNVGLPREDKDGANWELIKKIVSDTTAKPDATDIELTKQQ
FLELLKIRSSSELFRLDTAQEVMNRVDFRNAGKDQVEGLIVMSIDDGKSAGADLDSKYDA
IVAVVNSTSTEKSFVVKGATGFELHEVQQNSADDIVKGASFANETFTVPALTTAVFVQPQ
DGAQGAGLPVNTDNKDVSSIPPFGETVVYVKGTMNNWSDNSDWAMTFIGNGMYSVTGVLE
AGSHEFKFADTGWANPNIGCSVATVGSGSLELGADENCKLTVAETGKYNFTLNALYVQDE
KVEKPVVSVTKSADAPTFGETALYLRGTITSWDTPAQDSAAKFSYVANDVYSLDIDLAAG
SYEMKIASADWAADTNFGGEGSVELGKALTMEVGGGSANLKIAIAEAGNYNFHFNAADKS
APIVTVTKN
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
gtggacaataaaacattcaaattatcaacgattgccaaaaccgtactgcctttgatttcc
atcgcggtcatcagcggttgtggcagcgatagcacaagcgacgacaccacgaacccaggc
tctggcctataccctgcgggagagaacgaggttgtcatttactacaagcgcgatattgca
tccgcatcaacggcaagcgactacgaaggttggggcttgcacttgtggaacggcgaaggc
tgtaccagctccgacttagaagccatgggtattgctggcacaggtacggactggtctgca
ccgcgtccattcgacggcatcaacgacacctacggcgcttactacgtactgaaagtgaac
ccagatgcgtctgatccgcacgaatgtatgaacttcattctgcacaaaggcgatgagaaa
gccttcggcagctcgaactcaaaagtggagctgaccaaaattggcgattctaaaggtcta
tttggcttccacggcagcagcgagctttactacgagccaatcgaagaacgtccagtcgat
attgatggtcaaaaagcgcattggttagatgccaacactatcgcatgggaagcggcagcc
aatgctgattccatgaagctgttctacagcttgaccaacgacatccaaatggatgaagac
aagcaaatctctggcggtacagctgttgagctgaccaaagcgggcgatttgtctgacggt
cttaaatctcgtttccgccaccttgcaagccttcaagctgctggcattgatgtggacgat
gcaaccctacgtacgattctgaaatcacaaatcgtcatggtggcgtacaacgcaaatggc
gacgttatttctgcaactgaagtgcaaaagccgggcgttttggatgcggtgtttgccgac
tcccaggcaggtaacgcaattagccaagaactcggtgcgattgtggaaggcggcgcagca
accttcaagctttgggcgccaacagcgcaagacgttgctctgatcatctatgacgagaat
ctgaaagaagaaacaaccgttgcgatgaaagaagattcagcaaccggtatctgggtttct
gaagcgcaaagcaacgtcgtcaacaaatactaccgttacaaagttaaagtttaccaccca
acaacgggcgtcatcgaaactcgcttggtcaccgatccatattctctgagcttgtcgaaa
aattcgatgtactctcaagtgatcgatttggatgatccaagcttgatgccacaaggctgg
agcgactacgaacgcccaaccgttaaaaaagatgaagaccacgtactgtacgaatcacac
cttcgtgacttcagctttaacgatacaaaaggcaccaaagaatacaacggtaagtactta
gcactcacagaagcagaccgcgaatcggtctctcacttgcaagcactaaaagacgcaggt
ttaacaacgcttcacatcctgccagcgttcgatattgctacggttgatgaagaagcggcg
aaccgcgtcgatattactgacaccgtaggtaaattgtgtggcatcaaaccagaagcgtct
gtctgtgacgaagttgatggcgcgaaagtgattgaagatgtgctgaacagctacgatcca
gccaccggttctgcgcaagcactgatgaacgatttgcgcatgctagacagcttcaactgg
ggttacgacccattccattacacggtgccagaaggcagctacgcgaccgatccaaacggc
tcaaaacgtattcttgaattccgtgaaatggtgcaagcaacacacaaaatgaagctgaag
ctgatcatggacgtggtgtacaaccacaccaatgcctctggcattaacgacaaatccgtt
ctagataaaatcgtcccagggtactaccaccgtcttaacgtcaacactggcggcgtagaa
aactcaacctgttgtgacaacaccgcaacagaaaacttgatgatgggtaaactgatggtt
gactcattgaaagtgtgggcggacgactacaaagttgacggtttccgtttcgacttaatg
ggccaccagccaaaagatgtgatggtctacgcacttgagcaaatccgcaagattgacgaa
aacaccttgttctacggtgaaggttgggacttcggtgaagtgtctaacaacgctcgtttt
gatcaagccactcagctaaacatggctggcactgaaatcggtacgttctcggatcgtctg
cgtgacgctgttcgtggcggtagcccatttgatggcggtgtcgattcagaaggtaagcac
ccacttcgcttcaaccaaggttttggtaacgcggcttacgcgaatgaagaaaccaaagtg
gacgcagaatcggtgaatggtcgactacacaaccaagatttggttcgtctaggcatggcg
ggtaacttggctgacttcgttcttctagactacaaaggcgacacaaaattaggtaagaac
gttgattacaatggtgcgccagcaggctacacaaaagtgccatcagaaaacatctcgtac
gtgtctaagcacgataaccaaacactgtgggataacaacgcgtacaagattgcgaccgcg
actccttctgcagatcgtgctcgcatgcaatctgtctcgttatcaacagtaatgcttggc
caaggtatcccattcatccacatgggttctgagctgctgcgttctaaatcgatgcagcgc
gactcttacgattctggtgactggttcaaccgcgtcttcttcgacggcagtgacaacaac
tggaacgtaggtctgcctcgtgaagacaaagacggcgcaaactgggagctgatcaagaag
atcgtttctgatacgacagcgaagccagatgcaaccgacattgagctaaccaaacaacaa
ttcctagaactactaaaaatccgtagttcaagtgaactgttccgcttagataccgctcaa
gaagtcatgaaccgtgttgacttccgcaacgctggtaaagaccaagtggaaggcttgatc
gttatgtctatcgacgatggtaaatcagcaggtgccgatttggattcgaaatacgatgcg
atcgtggctgtggtgaactcaacatcaacagagaaatcatttgtcgtgaaaggcgcgaca
ggtttcgagctgcatgaagttcaacaaaactctgcagatgacatcgtgaaaggcgcaagc
ttcgcaaatgaaaccttcactgtgccagcactgactactgcggtattcgtacagccacaa
gacggcgcgcaaggtgcgggtctgccagtaaatacagacaacaaagacgtatcgagcatt
cctcctttcggtgaaaccgtggtttacgtgaaaggcacaatgaacaattggtcagacaac
agcgactgggcaatgactttcattggcaacggcatgtactcagtaacaggcgtacttgaa
gcaggcagccacgagttcaaatttgcagacacaggttgggcaaatccgaacatcggttgt
tctgtggcaacagtgggcagcggctctctggagctaggcgcagacgaaaactgtaaactc
accgtcgcagaaacaggcaagtacaacttcacactgaacgcgctatacgttcaagatgaa
aaagtggaaaaacctgtggtttccgtaaccaaatctgcggatgcaccaacgtttggtgaa
acagcactgtacctacgtggcaccatcacaagttgggacactccggcgcaagattcagca
gcgaagttcagctacgtcgccaatgatgtttattcgctagacattgacctagctgcaggt
agttacgagatgaagattgcaagtgcagactgggcagcagacaccaacttcggcggcgaa
ggcagtgttgagcttggtaaagcactgacgatggaagtcggtggcggtagtgcaaaccta
aaaattgcgattgcagaagcaggaaattacaacttccatttcaatgcggctgacaagtca
gcgccaatcgtaaccgtcacgaagaactga
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