Vicugna pacos (alpaca): 102524631
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Entry
102524631 CDS
T08098
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102524631 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102524631 (HERC4)
Enzymes [BR:
vpc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102524631 (HERC4)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
HECT type E3
102524631 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
102524631
NCBI-ProteinID:
XP_006212982
UniProt:
A0A6I9IH93
LinkDB
All DBs
Position
11
AA seq
1057 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG
SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS
PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNAQCPPDFDSEE
YFCVKRIFSGGDQSFSHYSNLQNSRPPDDFRCPDPSKQIWTVNEALIQKWLSYPSGRFPV
EIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTKFSGVDMNAARLLFHKLIQPDHPHISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLENWWSALEPPLFLKIVELFKEVVVHLLKLYKIGIPPSEGRIFNSFLHTALKVLEIL
HRVNEKAGQIIQYDKFYIHEVQEIIDIRNDYINWVQQQAYGMDVNHGLTELADIPLTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKKKPSLEDLKELVPD
VGRSMQQLLDYPEDDVEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAY
VDYIFNKSVASLFDAFHAGFHKVCGGKVLQLFQPNELQAMVIGNTNYDWKELEKNTEYKG
EYWAEHPTIKMFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLILVIQSTGGGEEYLP
VSHTCFNLLDLPKYTDKETLRSKLIQAIDHNEGFSLI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcttttggacagctaggtttgggtggaattgatgaagaa
attgtattagagcccagaaaaagtgacttttttataaataaaaaggtccgagatgtagga
tgtggactcagacatactgtatttgttctggatgatggaacagtgtacacatgtggatgt
aatgatctaggacagctaggtcatgaaaaatccagaaagaaaccagagcaggttgttgcc
ctggatgcccaaaatatcgtagctgtttcatgtggagaagctcatacattagcactaaat
gacaagggccaggtgtatgcttggggtctcgattctgatggacagcttggcctgctagga
tcagaggaatgtatcagagtacccagaaatattaaaagtttgtcagatatccagatagta
caggttgcttgtggttactatcattcacttgcactttctaaagcaagtgaagtcttctgt
tggggacagaataaatatggccagttgggtttaggcattgactgtaaaaagcaagcgtca
ccacagctgattaagtctttacttggaatccctttcatgcaagttgcagcaggaggcgcc
catagtttcgtacttaccctttctggagccatctttggatggggacgcaacaaatttggt
caactaggtcttaatgatgaaaacgataggtatgttcctaatttactaaagtcactaaga
actcagaaaatagtttatatttgttgtggagaagatcatactgctgcactaaccaaggaa
ggtggagtgtttacttttggagctggagggtatggtcagttgggtcataactctaccagt
catgaaataaacccaaggaaagtttttgaacttatgggaagcattgtcactcagattgct
tgtggaaggcagcacacttctgcttttgttccttcatcaggacgaatttattcttttgga
cttggtggtaatggacaactaggaactggctcaacaagcaacagaaaaagtcctttcact
gtgaaaggaaattggtttccatataatgcgcaatgtcctccagattttgattctgaagaa
tatttctgtgtaaaaagaattttctcaggtggagatcaaagcttttcacattactctaat
ctccagaactctaggccaccagatgactttagatgtcctgatccttcaaagcaaatctgg
actgtgaatgaagccctaattcaaaaatggctgagctacccctctggaagatttcctgta
gagatagccaacgagatagatggaacgttttcttcgtctggctgtctgaatggaagtttt
ttagctgttagcaatgatgatcactatagaactggcaccaaattttcaggggttgatatg
aatgctgctaggcttttgttccacaaacttatacaacctgatcatcctcatatatctcag
caggtggcagctagtttggaaaagaatcttattcctaaactgactagttccttacctgat
gttgaagcattgagattttaccttactctaccagaatgtcccctgatgagtgattccaac
aatttcaccacaatagcaattccctttggtacagcccttgttaacctagaaaaggcacca
ctgaaagtacttgaaaactggtggtcagcacttgaacctccactattcctcaagattgta
gagctttttaaggaggttgtggtacatcttttgaagctctacaagatcggcattccccct
tctgaaggaagaattttcaacagttttcttcatactgcactaaaggttttagaaatacta
catagggtaaatgaaaaagcaggacagattatacagtatgataaattttatatacatgaa
gtacaagaaataatagacataaggaatgattatatcaactgggtacaacagcaggcctat
ggaatggatgtcaaccatggattaactgagttggcagatatccctcttacaatctgcaca
tatccatttgtatttgacgcccaagcaaaaactactctgttacaaacagatgcagtctta
cagatgcagatggctattgaccaggcccacagacagaatgtctcctctctttttctccca
gtgattgaatctgtgaatccttgcttaattctagtggtccgtagagaaaatattgtagga
gatgcaatggaagtacttaggaagacaaagaatatagactacaaaaagccactcaaggtt
atattcgttggagaagatgctgttgatgcaggaggggtacgcaaggaatttttcttgctc
atcatgagggaattattggatcctaaatatggcatgtttaggtattatgaagattccagg
ctcatttggttttccgataagacatttgaagacagtgatttgttccatttgattggtgtt
atctgtggattagcgatttataattttactattgtggacctccattttcctttggcttta
tataagaaactgctaaaaaagaagccatccctggaagatttgaaagaactagtacctgat
gttgggagaagcatgcagcaactactggattatccagaagatgatgttgaggaaacgttt
tgtcttaattttacgatcacagttgaaaactttggtgcaacagaagtgaaagagctggtt
ctaaatggtgcagacacagctgttaacaaacaaaatcggcaggagtttgttgatgcttat
gtggattacatattcaataaatctgtggcttccttatttgatgcttttcatgcgggcttt
cataaggtctgtggagggaaggtccttcagctcttccagcctaatgaactacaagcaatg
gttatcggaaatacaaattatgattggaaggaactggaaaagaatacagaatacaaagga
gagtactgggcagaacatcctacaataaaaatgttttgggaagtatttcatgaattacca
ttggaaaagaaaaaacaatttttgttatttttgacaggtagtgatcgcattcctattctt
ggtatgaagagtctaatactagtcatccagtcaacaggaggtggtgaggagtatctccca
gtttcccatacctgttttaatcttctggatcttccaaaatatacagacaaagaaactcta
cgctctaaactgatccaagctattgatcacaatgaaggcttcagtttaatataa
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