Vicugna pacos (alpaca): 102524652
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Entry
102524652 CDS
T08098
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
102524652
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vpc04040
]
102524652
Ion channels [BR:
vpc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102524652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
RskA_C
FUT8_N_cat
PFF1_TM
FraC
Motif
Other DBs
NCBI-GeneID:
102524652
NCBI-ProteinID:
XP_031534273
UniProt:
A0A6J3AL14
LinkDB
All DBs
Position
5
AA seq
1997 aa
AA seq
DB search
MEQTVLVPPGPDSFNFFTRESLAAIERRIAEEKAKNPKPDKNDDENGPKPNSDLEAGKNL
PFIYGDIPPEMVSEPLEDLDPYYVNKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKIA
IKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLE
DFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASLEEHSVEKNVTMNYN
GTLVNETFIEFDWKSYIQDSRYHYFLEGFSDALLCGNSSDAGQCPEGYMCVKAGRNPNYG
YTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAV
VAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAVVTASEHSREPSAAGGLSD
SSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDDDEFHKSESEDSIRRKGFRFSIEGN
RLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFEDN
ESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVLPANGKMHSTVDCNGVVSLVGGPSVPT
SPVGQLLPEGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESRQ
KCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPM
TDHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLVELGLANV
EGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF
GKSYKDCVCKINSECTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLTVF
MMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHKGIAFVKRKIYE
FIQQSFVRKQKILDEIKPLDDLNNKKDSCMSNHTTEIGKDLDYLKDVNGTTSGIGTGSSV
EKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNESSSSS
EGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEEGRGKQWWNLRRTCF
RIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILEMLLKWV
AYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGDMFDIEEVNN
HSDCLILIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPK
YEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMK
KLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSEYVTSI
LSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSP
TLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNF
AYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSSV
KGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVW
EKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAFT
KRVLGESGEMDALRIQMEDRFMASNPSKVSYQPITTTLKRKQEEVSAVIIQRAYRRHLLK
RTVKQASFTYNKNKIKSGANLLVKEDMIIDRINENSITEKTDLTMSTAACPPSYDRVTKP
IVEKHEQEGKDEKAKGK
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcaacttcttcaccagagaa
tctcttgcggctattgaaagacgcattgcagaagaaaaggctaagaaccccaaaccagac
aagaatgatgatgagaatggcccaaagccaaacagtgacttggaagccggaaagaacctt
ccatttatttatggagacatccctccagagatggtgtcagagccgctggaggacctggac
ccgtactatgtcaataagaaaacttttatagtattgaataaagggaaggccatcttccgg
ttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaatagct
attaagattttggtacattcattattcagcatgctaattatgtgcactattttgacgaac
tgtgtgtttatgacaatgagtaatcctcctgactggacaaagaatgtagagtacaccttc
acaggaatatatacttttgaatcacttataaaaattattgcaaggggcttctgtttagaa
gattttactttccttcgggacccatggaactggctcgacttcactgtcattacatttgca
tatgtgacagagtttgtggacctgggcaatgtctctgcattgagaacattcagagttctc
cgagcactgaaaaccatttcagtcattccaggcctgaagaccatcgtgggggccctgatc
cagtcagtgaagaagctctcggatgtcatgatcctgactgtgttctgtctgagcgtgttt
gctctgatagggctgcagctcttcatgggcaacctgcggaataagtgtgtacagtggcct
cccaccaatgcttccctggaggaacatagtgtagagaagaatgtaactatgaattacaat
ggcacgcttgtaaacgaaacgttcattgagtttgactggaagtcatacattcaagattca
agatatcattattttctggagggtttttcagatgcacttctatgtggaaatagctctgat
gcaggccaatgtccagaaggctacatgtgtgtgaaagctggtagaaatcccaattatggc
tacacaagcttcgataccttcagttgggcttttttgtctctgtttcgactcatgactcag
gacttctgggaaaatctttaccaattgacattacgtgctgctgggaaaacatacatgata
ttttttgtgctggtcattttcttgggctcattctatctaataaatttgatcctggctgtg
gtggccatggcctatgaggaacagaatcaggccaccttggaagaggcagaacagaaagag
gctgaatttcagcagatgctcgaacagctgaaaaagcaacaggaggcagctcagcaggca
gcagttgtaactgcctcagagcattccagagaacctagcgcagcaggcgggctctcagac
agctcatctgaagcctccaaattgagttccaagagtgctaaggaaagacgaaatcggaga
aagaaaagaaaacagaaggagcagtcgggtggagaagagaaggatgatgatgaattccat
aaatctgaatctgaagacagcatccggaggaaagggtttcgcttctccatcgaagggaat
cggttgacatatgaaaagaggtactcctccccacaccagtctttgttgagcatccgtggc
tccttattttctccaagacgaaacagccgaacaagcctattcagcttcagagggcgggca
aaggatgtgggctcagagaatgactttgccgatgatgagcacagcacctttgaggacaac
gagagccgcagagactccttgtttgtgcccagacgacacggagagcgacgcaacagcaac
ctaagccagaccagtaggtcgtcccggatgctggccgtgcttccagcgaatgggaagatg
cacagcactgtggactgcaacggtgtggtttccttggttggtggaccttcagtgcctacg
tcgcctgttggacagcttctgccagagggaacaaccaccgaaactgaaatgagaaagaga
aggtcaagttcgtttcatgtttccatggactttctagaagatccttcccaaaggcaaaga
gcaatgagtatagccagcattttaacaaatacagtagaagagcttgaagaatccaggcag
aaatgcccaccctgttggtataagttttccaacatattcttaatctgggactgttcacca
tattggttaaaagtgaaacatattgtcaacctggtcgtgatggacccatttgttgacctg
gccatcaccatctgcattgtcttaaataccctcttcatggccatggagcactatcccatg
acggaccattttaataatgtgcttacagtaggaaacttggttttcactgggatctttaca
gcagaaatgtttctgaaaattattgccatggatccttactattatttccaagaaggctgg
aatatctttgatggttttattgtaacgcttagcctggtagaacttggtctggccaacgtg
gaaggattatctgttctccgttcattccgattgcttcgagttttcaagttggcaaaatct
tggccaacattaaatatgctaataaagatcattggcaattcggtgggagctctgggaaat
ctaaccttggtgttggccatcatcgtcttcattttcgccgtggttggcatgcagcttttt
ggtaaaagctacaaagattgtgtctgcaagatcaacagcgagtgtacactcccacgctgg
cacatgcatgacttcttccactccttcctgattgtgttccgggttctgtgtggagagtgg
atagagaccatgtgggactgcatggaggttgctggtcaagccatgtgcctcactgtcttc
atgatggtcatggtgattggaaacctagtggtcctgaacctctttttggccttgcttctg
agctcatttagtgcagacaaccttgcagccactgatgatgataatgaaatgaacaatctc
caaattgccgtggataggatgcacaagggaatagcttttgtgaagagaaagatatatgaa
tttattcagcagtccttcgttagaaaacaaaagattttagatgaaattaagccacttgat
gatctaaacaacaagaaagacagttgtatgtccaatcatacaacagaaattgggaaagat
cttgactatcttaaagatgtaaatggtaccacaagtggaataggaactggcagcagtgtt
gaaaaatacatcattgatgaaagtgactacatgtcgttcataaacaatcccagtcttaca
gtgactgtaccaattgctgtaggagagtctgactttgaaaatttaaacacagaggacttc
agtagtgaatcagatctggaagaaagcaaagagaaacttaatgaaagcagtagctcctct
gaaggcagcaccgtggacattggagcgcctgcagaggaacagcctgtggtggaacctgag
gaaacccttgaacctgaagcctgtttcactgaaggctgtgtacaaagattcaagtgttgt
caaatcagtgtggaagaagggagaggaaaacaatggtggaacctgagaagaacgtgtttc
cgaatagttgagcataactggtttgagaccttcattgttttcatgattctccttagcagt
ggtgctctggcatttgaggatatctatattgatcaacgaaagacgatcaagacaatgttg
gaatatgctgacaaggttttcacttacattttcattctggaaatgcttctaaaatgggtg
gcatatggctatcaaacgtatttcaccaatgcctggtgttggctggacttcttaattgtt
gatgtttcacttgtcagtttaacagcaaatgccttgggttactcagaacttggtgccatc
aaatctctcaggacactaagagctctgagacctctgagagccttatcacgatttgaaggg
atgagggtggttgtgaatgcccttttaggagcaattccatccatcatgaatgtgcttctg
gtttgtcttatattctggctaattttcagcatcatgggcgtaaatttgtttgctggcaaa
ttctaccactgtgttaacaccacaactggtgacatgtttgacatcgaagaagtgaataat
cattctgattgcctaatactgatagaaagaaatgagactgcccgatggaaaaatgtgaaa
gtaaactttgataatgtaggatttgggtatctctctttgcttcaagttgccacctttaag
ggatggatggatataatgtacgcagctgttgattcacgaaatgtggaactccagccgaag
tatgaggaaagtctatacatgtatctttactttgttattttcatcatctttgggtccttc
ttcaccctgaacctgtttattggtgtcatcatagataatttcaaccagcaaaaaaagaag
tttggaggtcaagacatctttatgacagaagaacagaagaaatactataatgcaatgaaa
aaactaggatcaaaaaagccacaaaagcctatacctcgaccaggaaacaaatttcaagga
atggtctttgactttgtaaccagacaagtctttgacataagcatcatgattctcatctgt
ctcaacatggtcacaatgatggtggaaactgatgaccagagtgaatatgtgacgagcatt
ttgtcacgcatcaacctggtgttcattgtgctgttcactggagagtgtgtgttgaagctc
atctccctccgacattattattttaccataggctggaatatttttgattttgtggttgtc
attctctccattgtaggtatgtttctggctgagctgatagagaaatattttgtgtcccct
accctgttccgagtgatccgtctcgccaggattggccgaatcctgcgtctgatcaaaggg
gcgaaggggatccgcacgctgctctttgctttgatgatgtcccttcctgcgttgtttaac
atcggcctcctgctcttcctggtcatgttcatctacgccatctttggcatgtccaacttc
gcctatgttaagagggaagttggaattgatgatatgttcaactttgagaccttcggcaac
agcatgatctgcctgttccagatcacgacctctgctggctgggatgggttgctagcacct
attctcaacagtaaaccacccgactgtgaccctaataaagttaaccctggcagctcagtt
aagggagactgtgggaacccctctgtagggattttcttttttgtcagttacatcatcata
tcgtttctggttgtggtgaacatgtacatcgctgtcatcctggagaacttcagtgttgct
actgaagaaagtgcagagccgctgagtgaggatgactttgagatgttctacgaggtttgg
gagaagtttgatccggatgccacccagttcatggaatttgaaaaactgtctcagtttgca
gctgctcttgaacctcccctcaatctgccacaaccgaacaaactccagcttattgccatg
gatttgcccatggtaagtggtgaccgaatccactgtcttgacatcttatttgcttttacg
aagcgggttctgggggagagtggagagatggacgctcttcgaatacagatggaagatcga
ttcatggcttccaacccatcaaaggtctcctatcagccaataactacaactttaaaaaga
aaacaagaggaggtgtccgctgttattattcagcgtgcttacaggcgccaccttttaaaa
cgaactgtaaaacaagcttcatttacatataataaaaataaaatcaaaagtggggctaat
cttcttgtaaaagaagacatgataattgaccgaataaatgaaaactctattacagaaaaa
actgatctgaccatgtccacagcagcttgtccaccctcctatgatcgagtaacaaagcca
atcgtggagaaacacgagcaggaaggcaaagatgaaaaagccaaagggaaataa
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integrated database retrieval system
