Vicugna pacos (alpaca): 102524789
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Entry
102524789 CDS
T08098
Name
(RefSeq) protocadherin beta-18-like
KO
K16494
protocadherin beta
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
102524789
Cell adhesion molecules [BR:
vpc04515
]
Cadherins
Protocadherins
102524789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
102524789
NCBI-ProteinID:
XP_031528070
UniProt:
A0A6J3A1L5
LinkDB
All DBs
Position
3
AA seq
806 aa
AA seq
DB search
MMFGQGAMEPGEGSPQQIRQVLLFFVFLGGSLVCSETWHYSVAEETEMGSFIGNVVKDIG
LDVEDLAARGATVIFDDYKPYLLLDQQTGNLLLNEQLDREALCDFTEPCILHFQVLFENP
LQFFRAELWVKDINDHTPTFLDKHILLKISESTAPGTSFQMDSAQDLDVGKNGVQNYTLS
PNPHFLLKLQDSDEGRKYPELLLDQSLDREKEPELKLTLTALDGGSPPRSGTALVRVLVL
DINDNAPEFERPLYEVLVPEDSPLNSLVVKVSATDIDAGINGELSYSFSHVSRDIRKTFE
IHPISGEVRLKALLDFELIQSYTINIQAIDGGSLSGKSSILVHVVDVNDNPPEIVITSLT
SPIPENSSPEMVVAVFSLRDQDSGDNGRMVCSIQEDLPFLLKPTFKNFYTLVTESPLDRE
SKAKYNITITVTDMGTPRLKTQHNITVLVSDVNDNAPAFTQASYTLRVRENNSPALHIGT
VSATDTDAGANAQVTYSLLPPADPHVPLASLVSINADNGHLFALRSLDYEALRAFEFRVG
AADRGSPPLSSQALVRVLVEDDNDNAPFVLYPLQNTSAPCTELLPRAAEPGYLVTKVVAV
DGDAGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARPLSERDAARHRLLVLVKDNGQPPL
SASVTLHVLLVDGFSQPHLPPPEAEAEAAAAAPADALTVYLVVALASVSSLFLFSVLVFV
AVRLCGRGGAARAGRCSVPEGPFPGHLVDVSGTGTLSHSYQYEVCLTGDSGSNEFKFLKP
VLPNILGQDVGRKLEVKPTFQNSLGI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggccagggagccatggagccgggagaagggagccctcagcagataaggcaa
gtgctgcttttctttgttttcctgggagggtctttggtgtgttcagagacctggcactat
tctgtggcagaggaaacggagatgggatcctttataggcaacgtggtgaaagacataggt
ttggatgtggaagacctggctgcacggggagccacagtcatctttgacgactataagcca
tacttgcttttagatcagcagactggcaacttgctcttaaatgagcaactggaccgggag
gcactttgcgatttcaccgagccatgtatattgcatttccaggtattatttgaaaatcct
ttgcaattttttcgggctgagctttgggtcaaagacataaatgatcacactcccacattc
ctagacaaacatatacttctgaaaatctcagaaagtactgctccaggaacctcattccaa
atggatagtgctcaggacttggatgtaggcaagaatggtgtccaaaactacacattaagc
cccaatcctcatttcctccttaaactgcaagacagtgacgagggcagaaaatacccagag
ctgttactggaccaatctcttgatcgagaaaaggagcctgaacttaaattaacactaaca
gccctggatggtgggtctccgcccagatctggaactgcactggtgcgtgtgttggtctta
gatatcaatgacaatgccccagagtttgagaggcccctctatgaggttctggtaccagaa
gacagccctctgaactccttggttgtcaaggtgtcggctacagatatagatgcaggaata
aacggagaactatcttattcattttcgcacgtctccagagacatacggaaaacatttgaa
atccatccaatttctggtgaagtccgtttaaaagcgcttctggattttgagttaattcaa
tcttatacaataaatattcaggccattgacggtggtagcctttcgggaaaatcatcaatt
ttagttcatgttgtagatgtgaatgacaacccaccagaaattgtcataacatctcttacc
agtcccatcccagaaaattcgtcgcctgaaatggtggtcgctgtttttagtctacgagat
caagactctggggacaatgggaggatggtttgctcaattcaggaagatctcccctttctc
ttgaagcctaccttcaaaaatttctacaccttggtaacagagagcccactggacagagag
agcaaagccaaatataatatcaccatcacggtcacagatatgggaacccccaggctgaaa
acccagcacaacataacggtactagtgtccgacgtcaacgacaacgcccccgccttcacc
caggcctcctacaccctgcgggtccgcgagaacaacagccccgcgctgcacatcggcacc
gtcagcgccacagacacagacgcaggcgccaacgcccaggtcacctactcgctgctgccg
cccgccgacccgcacgtgcccctggcctccctcgtgtccatcaacgccgacaacggccac
ctgttcgccctgcggtccctggactacgaggccctgcgcgccttcgagttccgcgtgggc
gccgccgaccgcggctcgccgccgctgagcagccaggcgctggtgcgcgtgctcgtggag
gacgacaacgacaacgcgcccttcgtgctgtacccgctgcagaacacctcggcgccctgc
accgagctgctgcccagggcggccgagccgggctacctggtgaccaaggtggtggcggtg
gacggcgacgcgggccagaacgcctggctgtcgtaccagctgctcaaggccacggagccc
gggctgttcggcgtgtgggcgcacaacggcgaggtgcgcacggccaggccgctgagcgag
cgcgacgcggccaggcacaggctgctggtgctggtcaaggacaacggccagccgccgctg
tcggccagcgtcacgctgcacgtgctgctggtggacggcttctcgcagccccacctgccg
cccccggaagcggaagcggaggcggcggccgcggcgccggccgacgcgctcaccgtctac
ctggtggtggccttggcgtccgtgtcgtcgctcttcctcttctcggtgctggtgttcgtg
gcggtgcggctgtgcgggcggggcggggcggcgcgggcgggtcgctgctcggtgcccgag
ggccccttcccgggccacctggtggacgtcagcggcaccgggaccctgtcccacagctac
cagtatgaggtgtgtctgacgggagattctgggagtaatgagttcaaattcttgaagcct
gtcttacccaatattctaggtcaggacgttgggaggaagctggaggtaaagccaactttc
cagaatagtttaggtatttga
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