Vicugna pacos (alpaca): 102524855
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Entry
102524855 CDS
T08098
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X2
KO
K26583
transcriptional-regulating factor 1
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102524855 (TRERF1)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
102524855 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2
zf-C2H2_4
Myb_DNA-binding
zf-met
zf-C2H2_2
Myb_DNA-bind_7
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
102524855
NCBI-ProteinID:
XP_006202064
UniProt:
A0A6I9I596
LinkDB
All DBs
Position
20
AA seq
1212 aa
AA seq
DB search
MGDQQLYKTNHVAHSGENLFYQQPPLGVHSGLNHNYGNTVPGAGMDAPQASPISPHFPQD
TRDGLGLPVGSKNLGQVDTSRQGGWGGHAGPGNHVQLRGNLTNSNMMWGAPAQAEPTDGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPVEPAAPALPSRYQQVPQQPHPGFTGGLSKPALQVGQHPSQGHLYYDYQQPL
TQMPVQGGQSLQAPQMLSQHMQQIQQHQYYPQQQQQPVGQQRLSMQEMQPQPQQQIRPPQ
PQQQPQQQLQQRQGSMQIPQYYQSQPIMQHLQEPQQPQMHLQPPSYHRDPHQYTPEQAHA
VQLIQLGSMPQYYYQEPQQPYGHPLYQQSHLPQHQQHEDSQPKTYPSDRQAQAMLSSHGD
LGPPDTGMGDPASSDLNRVGSALPHRPLLSPSGIHLNNMGPQHQQLSPSAMWPQMHLPDG
RAQPGSPESSGQPKGVFGEQLDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRASPSLKQ
EEGEKAPPPQPQPPLPPPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPSSQGFANSVA
AAPSARDKPASLMSDDEMPVLVRMTLSPPHSPQGAAPHPPAEIPKKHQPGVAKAEEPLKT
APDKKKFRHRPEPLFIPPPPSYHPNPAASYSGATLYQSQLRSPRVLGDHLLLDAAHELPP
YTPPPMLSPVRQGSGLFSTVLISGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNVTVT
PGPGEQTIDVEPRINIGLRFQAEIPELQDVSALAQDTHKATLVWKPWPELENHDLQQRVE
NLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMAALEMLLLRKPVRLKCHPLANYHYAGS
DKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLAE
IIDDCVTSEEEEEVEEEEEDPEEDRKSTREEETELLKSPEPPPGPVLAAAEGPPLQVLGQ
PSGSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKARGAVPSGKQKPGSAQSGYCSVK
SSPSHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEM
AATIERTTGPVGPPGLLPLDQLSLIKPIKDVDILDDEVVQQLGGVMEEAEVVDTGLLLDD
QDSVLLQGDTEL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcagcaactgtacaagaccaaccacgtggcccacagtggtgagaaccttttc
taccagcagccaccacttggcgtccacagcgggctgaaccacaactatgggaatacagtc
cccggggctggaatggatgcccctcaggcatcacccatttcccctcacttccctcaagac
actcgggatggtctgggcttgcctgttggctccaaaaacctgggccaagtggacacctcg
aggcagggagggtggggaggccatgcagggcctggaaaccatgtccagctacgtggcaac
ctgaccaattcgaacatgatgtggggggcaccagcccaggcggagcccaccgatggctac
cagtacacctactcccaggccagtgagatccggacccagaagctcaccagtggtgtcctg
cacaagctagactcttttacccaggtgtttgccaaccaaaacctgcgaatccaggtcaac
aatatggcccaggtgctgcatacccagtcagcagtgatggacggagccccagacagtgcc
ctccgccagctgctgtcccagaagcccgtggagcccgcagcaccggctctcccttcccgc
taccaacaggtcccccagcagccccaccctggtttcactggcgggctgtccaaaccagct
cttcaggtggggcagcacccaagccaggggcacctgtattatgactaccagcagccactg
actcagatgcctgtgcagggaggacagtcactgcaggcaccccagatgctgtcccagcac
atgcagcagatacagcagcaccagtattacccgcagcagcaacagcagccggtggggcag
cagcgtctgtcgatgcaagaaatgcagccgcagccgcagcagcagatccgccctccacag
ccccagcagcaaccgcaacagcagctgcagcagcggcagggttcaatgcagatacctcag
tattaccagtcccaacccataatgcagcatttgcaagagccacagcagccacagatgcac
ctgcagcccccttcgtatcacagggacccccaccagtacaccccggagcaggcacacgct
gtccagctgatccagctgggatccatgccccagtactactaccaggagccccagcagccc
tacggccaccccctgtaccagcagagccacctgccccagcaccagcagcatgaggacagt
cagcccaagacatatccaagcgacaggcaggcccaggccatgctgagctcccacggggac
ctggggcctccagacacaggaatgggagaccctgcaagctcggacctgaaccgggtcggc
agtgctctcccccaccggcctcttctgtccccaagtggcatccacctcaacaacatggga
cctcagcaccagcagctgtctcccagtgccatgtggccccagatgcatctacctgatggc
agagcacagccagggtccccggagtcaagtggccaaccaaaaggagtgtttggggagcag
ttggatgccaagaacaagctgacatgctccatctgcctgaaggagttcaagagcctgcct
gccctgaacggccacatgcggtcccacgggggaatgagggcctcccccagcctcaaacag
gaggaaggagagaaggccccgccgcctcagccccagccaccactgccgcctccgcctccg
ccgccaccgcagctccctcccgaggcagaaagcctcacgcccatggtcatgcccgtgtct
gtccctgtcaagcttctcccgcccaagcccagctctcagggcttcgccaacagcgtcgct
gcagccccctcggccagagacaagcccgccagcttgatgtcggacgacgagatgcctgtg
ctcgtgaggatgaccctctctcccccacactcaccccaaggggctgccccccacccgcct
gctgaaattcccaagaagcatcagcccggcgtggccaaagccgaggaacccctcaagacc
gcgccggacaagaaaaagttccggcaccggcccgagccgctcttcatcccgcctccgccc
tcctaccaccccaaccccgccgcctcgtactcgggcgccaccctgtaccagagccagctg
cgctccccgcgcgtcctgggcgaccacctgctcctggacgccgcccacgagctgcccccc
tacacgcccccgcccatgctgagcccggtgcgccagggctcggggctcttcagcaccgtg
ctcatctccggccacggccccggcgcgcacccgcagctgcccctcacgccgctgacgccc
acgccgcgcgtgctgctctgccgctccaacagcatcgatggcagcaacgtgacagtcacc
ccggggcctggagagcagaccattgacgttgaaccacgcatcaatattggcttgagattc
caagcagagatcccagaactccaggatgtctctgccctggcccaggacacacacaaggcc
accctggtgtggaagccctggccagagctggaaaaccacgacctccagcaaagagtggag
aatctcctgaatttgtgctgttcaagtgcgttgccaggtggagggaccaattctgaattt
gctttgcactctctcttcgaggccaaaggtgatgtgatggctgctctggaaatgctgctg
ctgcggaagccagtcaggttaaaatgtcatcctttagcaaattaccactatgccggttca
gacaagtggacctccctagaaagaaaactgtttaacaaagcactagccacttacagcaaa
gactttatttttgtacagaagatggtgaagtccaagacggtggctcagtgcgtggaatac
tactacacatggaaaaaaatcatgcggttggggcggaaacaccggacacgcctggcagaa
atcatcgacgattgcgtgacgagtgaagaagaagaagaggtagaggaggaggaggaggac
ccggaagaagacaggaagtccacgagagaagaggagactgaattgctgaagtccccggag
cctccaccaggcccggtcctggctgctgcagaggggccacccctgcaggtcctgggccag
ccctcaggctccttcatctgtgagatgcctaactgcggggctgtgttcagctcccgacag
gcactgaacggccatgcccgcatccacggtggcaccaaccaggtgaccaaagctcggggt
gctgtcccttctgggaagcagaagcctggcagtgcccagagcgggtactgctcggtgaaa
agctcaccctctcacagcaccaccagcggcgagacagaccccaccaccatcttcccctgc
aaggagtgcggcaaagtcttcttcaagatcaaaagccgaaatgcgcacatgaaaacgcac
aggcagcaggaggaacagcagagacagaaggctcagaaggcggcttttgcggctgaaatg
gcagccacgatcgagagaactacggggccggtggggccgccggggctgctgcccctggac
cagctgagtctgatcaaacccatcaaggacgtggacatcctcgatgatgaggtcgtgcag
cagctaggaggcgtcatggaagaggccgaggtggtggacaccggtctcctcttggatgat
caagattcagttttgcttcagggtgacacggaactctaa
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integrated database retrieval system
