Vicugna pacos (alpaca): 102524976
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Entry
102524976 CDS
T08098
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03013
Nucleocytoplasmic transport
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102524976 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
102524976 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102524976 (THOC5)
03041 Spliceosome [BR:
vpc03041
]
102524976 (THOC5)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102524976 (THOC5)
Spliceosome [BR:
vpc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102524976 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
102524976
NCBI-ProteinID:
XP_006213593
UniProt:
A0A6I9II20
LinkDB
All DBs
Position
32
AA seq
694 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPSEGKRNRSETEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDAAVEIEERRIRSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRESLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDH
GKKTPNPANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSA
SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHED
YMELHFTKDIVETGLAGDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGE
KTNNNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcgagcaaaaaacggaagcccaaagtgatccgaagtgatggagctcca
tctgaagggaagcgtaatcgttctgaaactgaacaggaaggtaaatactacagcgaggag
gctgaggtggacctgcgggaccccggcagagactacgagctgtacaagtacacatgccag
gagttgcagaggctcatggctgagatccaggacctgaagagcaggggaggcaaggatgcg
gcagttgagattgaagaacggaggatccggagctgtgtgcattttatgactctaaagaag
cttaaccgcttagcccacatcaggttgaagaaaggaagagatcagacccatgaggccaag
cagaaagtggacgcctatcacctgcagctccagaacctgctgtatgaggtgatgcacctg
cagaaggagatcaccaaatgtctggagtttaagtcaaagcacgaagaaattgatctggtc
agcttggaggagttttataaggaggctcctccggatatcagcaaggcagaagtcaccatg
ggagaccctcaccagcaaactcttgcacgtctggactgggagctggagcagcggaaaagg
ctggcagagaaataccgagagagcctgtccaacaaggagaagatcctcaaggagatcgag
gtgaagaaagaatacctgagcagcctccagcctcgtctcaacagcatcatgcaggcttct
ctcccggtgcaggagtacctgtttatgcccttcgaccaggctcacaagcaatatgagaca
gccagacacctgccacctcccctctatgtcctctttgtccaggccactgcatatgggcag
gcctgtgctcatatgaaatcctcccagccccctagacaggataagacgttgtctgtggcg
atcgaaggcagtgtggacgaagccaaggctctgttcaagcctcccgaggactcccaagat
gacgagagcgactcggatgctgaggaggagcagaccacgaagcgccggcgacccacactg
ggagttcagctggatgacaagcgcaaggagatgctgaagaggcacccgctatccgtcatg
ctggacctgaagtgcaaagatgacagtgtactgcacctgactttctactacctcatgaac
ctcaacatcatgacggtaaaagccaaagtgacaaccgccacggagctgatcacccccatc
agtgcaggtgacttgctgtctcctgactcagtcctgagctgtttgtatcctggggatcac
ggaaagaaaactccaaatccagccaatcagtatcagtttgataaagtgggcatcctgact
ttgagagactatgtacttgacctcggtcacccctatctgtgggtgcagaagctgggtggc
ctccacttccccaaagagcagccccagcacactgtgattgctgaccactcactgagtgcc
agccacatggagaccaccatgaaactgctgaagaccagggtgcagtcccgcctggccctc
cacaagcagtttgcctccctggaacatggcattgtgccagttaccagcgattgccagtac
ctcttccctgcaaaggtggtctctcgcctggtgaagtgggtgacaattgcccatgaggat
tacatggagctgcatttcaccaaagacatcgtggagacaggactggctggggacaccaat
ctctactacatggcactcgtggaaaggggcacagctaaactccaggctgctgtggtgctg
aaccctggctactcctccatcccacccattttccagctctgtctaaactggaaaggggag
aaaaccaacaacaatgatgacaacattcgggccatggagagcgaggtcaacgtgtgctac
aaggagctgtgcggcccccggcccagccaccagctcttgaccaaccagctgcagcgcctg
tgcgtgctgctggacgtctacctggagaccgagagccacgacgacagtgtggaggggccc
aaggaatttccccaggaaaagatgtgtctgcggctttttaggggtcccagcaggatgaag
ccatttaaatataaccatcctcaaggattcttcagccatcgctga
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