Vicugna pacos (alpaca): 102525334
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Entry
102525334 CDS
T08098
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102525334 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vpc04147
]
102525334 (IRF6)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102525334 (IRF6)
Exosome [BR:
vpc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102525334 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
102525334
NCBI-ProteinID:
XP_006198790
UniProt:
A0A6I9HY83
LinkDB
All DBs
Position
23
AA seq
467 aa
AA seq
DB search
MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAW
AVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQ
GSIINPGSTGSAPWDEKDNDVDDEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGN
CSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQT
MTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDR
GLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQK
GQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVR
LQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPTPSMQLPPALPAQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggccctccacccccgcagagttcggctgaagccttggctggtggcccaagtggacagt
ggcctgtaccctgggctcatctggctacacagagactccaaacgcttccagattccctgg
aaacatgccacccggcatagcccccaacaggaggaagaaaataccattttcaaggcctgg
gccgtggagaccgggaagtaccaggaaggggtggatgaccctgacccagctaaatggaag
gcccagctccgctgtgctctcaacaagagcagggaattcaacctgatgtatgatggcacc
aaggaggtgcccatgaacccagtgaaaatatatcaagtgtgtgacatcccccagccccag
ggctcaatcattaacccaggatccactggatctgctccttgggatgagaaggataatgat
gtggatgacgaagatgaggaagatgagctcgatcagtcacagcaccatgttcccatccag
gacaccttccccttcctgaacatcaatggttctcccatggcaccagccagtgtgggcaac
tgcagcgtgggcaactgcagccccgaagcagtgtggcccaaaaccgagcctctggagatg
gaagtgccccaggcacccatacagcctttctatagctctccggagttgtggatcagctcc
ctcccaatgactgacctggacatcaagtttcagtaccgtgggaaggagtatgggcagacc
atgaccgtgagcaacccccagggctgccggctcttctatggagacctgggtcccatgcct
gaccaggaagagctctttggtcccgtcagcctggagcaggtcaagttcccaggtccggag
catatcaccaatgagaagcagaagctgttcaccagcaagctgctagacgtcatggacaga
ggactgatcctggaggtcagcggtcatgccatttatgccatcaggctgtgccagtgcaag
gtgtactggtctgggccatgtgccccatcgcttgttgcccccaacctgattgagagacaa
aagaaggtcaagctattttgtctggaaacgttccttagtgatcttattgcccaccagaaa
ggacagatagagaagcagccaccgtttgagatctacttatgctttggggaagaatggcca
gatgggaaacccctggaaaggaagctcatcttggttcaggtcattccagtggtggctcgg
atgatctatgagatgttctctggtgatttcacacgatcctttgacagtggcagtgtccgc
ctgcagatctcaactccagacatcaaggataacattgttgctcagctgaagcagctgtac
cgcatcctccaaacccaggaaagctggcagcccatgcagcccacccccagcatgcagctg
ccccctgccctgccggcccagtaa
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