KEGG   Vicugna pacos (alpaca): 102525556
Entry
102525556         CDS       T08098                                 
Symbol
PNKP
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102525556 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vpc01009]
    102525556 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpc03400]
    102525556 (PNKP)
Enzymes [BR:vpc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     102525556 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     102525556 (PNKP)
Protein phosphatases and associated proteins [BR:vpc01009]
 HAD phosphatases
  Other HAD phosphatases
   102525556 (PNKP)
DNA repair and recombination proteins [BR:vpc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102525556 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 HAD TSP1_spondin
Other DBs
NCBI-GeneID: 102525556
NCBI-ProteinID: XP_031537914
UniProt: A0A6J3AVP1
LinkDB
Position
11
AA seq 598 aa
MKGRGFCRRRSQSPAPLVGESFPSTEKQKAAGGVAGRPPWAGPPWSEVGSVLPEGRSGAS
SPGKRREPQAGKPAPRVAMVEAQGRLWLESPSGGAPPIFLPSGGQALVLGRGPLTLVTDR
KCSRNQVKLVADPETRTVAVKQLGVNPSTAGTQVLSPGLEASLGVGDTLYLVNGLHPLTL
RWEEARTPESQPDTPLGTPPVAPDKEEEDVEQQKKRIRKSSPVWESFGKLLVFTAPDVKP
RGKVAGFDLDGTLITTRSGKVFPTGPSDWRILYLEIPHKLRELDAEGYKLVIFTNQMGIG
RGKLPAEEFKAKVEAVMEKLGVPCQVLVATHAGLYRKPVIGMWDHLQEQGNEGVPISIRD
SIFVADAAGRPANWAPGRKKKDFSCADRLFALNLGLTFATPEEFFLKWPVARFELPAFDP
RTISRSGPLCLPESSTLLSSDPEVVVAVGFPGAGKSTFFQEHLVSAGYVHVNRXXXXSWQ
RCVSTCETALKQKKRVVIDNTNPDIQSRARYIKCAQDAKVPCRCFLFSTTLEQARHNNRF
REMTDPSHVPVSDIVIFGYRKQFEAPTLAEGFSEILEIPFRLHVAPRFERLYCQFSEG
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgaaggggcggggcttctgtcgtaggcggagccaatccccagcccccttggtaggcgag
tcatttccgtccacggagaaacagaaagcagcgggcggagtagcgggcaggccgccttgg
gccggacctccctggtcggaagtggggtccgtgcttccagagggacggagcggagcgtcg
tcgcctgggaaacggcgtgagccccaggccggcaagccggctcccagggtggccatggtg
gaggcccagggccggctatggctggagagcccctctgggggagcgcctcccatcttcctg
ccctcaggcgggcaagccctagtcctgggccggggacccttgactctcgttaccgaccgg
aagtgctccagaaaccaagtgaaactggtcgcagaccctgagactcggactgtggcagtg
aaacagctgggcgttaacccctcaactgccgggactcaggtgctgagcccggggttagag
gcctctctaggggtaggggacacgttgtatttggtgaacggcctccacccgctgaccctg
cgctgggaagaggcccgcacgcccgaatcccagccagatactccactcggtacccctcct
gtggccccagacaaagaggaggaggatgttgagcagcagaaaaagcgaatacggaagtca
tcccctgtctgggagagcttcgggaagctgctagtgttcactgcacctgatgtgaagcct
cggggcaaggtggccggttttgatctagatgggaccctcatcaccacacgttctgggaag
gtctttcccactggccccagtgactggaggatcctgtacctcgaaattccgcacaagctc
cgggaactggatgccgagggttacaagttggtgatcttcaccaaccagatgggcattggg
cgcgggaagctgccagcagaggagttcaaagccaaggtggaggctgtgatggagaagctg
ggggtcccctgtcaggtgctggtggccacacacgctggcttgtaccggaagccggtgatt
ggcatgtgggaccacctgcaggagcagggcaatgagggtgtgcctatctccatcagggac
agcatctttgtggcagacgcagctgggcgcccagccaactgggcccctgggagaaagaag
aaagacttctcttgtgcagaccgcctgtttgccctcaacctaggcctgaccttcgccacc
ccagaggagttcttcctgaagtggcctgtggccaggtttgagctcccagcctttgacccg
aggaccatctcccgctctgggcctctttgcctccctgagtccagcaccctcttaagctca
gaccccgaggtggttgtcgccgtgggatttcctggggctgggaagtccaccttcttccag
gagcacctcgtgtcagctggatacgtgcacgttaacaggnnnnnnnnnnnctcatggcag
cgctgtgtgagcacgtgcgagacagccttgaagcagaagaaacgggttgtgatcgacaac
acaaatccagacatccagagccgggccaggtacattaagtgtgcccaagatgcaaaggtc
ccctgccgttgcttcctcttcagcaccaccctggagcaggcgcgccacaacaacaggttc
cgggagatgacagacccctcccatgtcccggtgtctgacattgtcatattcggctacagg
aagcagttcgaggcgcccacgttggcagaaggcttctcagagatcctggagatcccgttc
cggctgcacgtcgcgccgcggtttgagaggctgtactgccagttttcagagggctga

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