Vicugna pacos (alpaca): 102525653
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Entry
102525653 CDS
T08098
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102525653 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102525653 (JMJD1C)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
102525653 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
C1_2
zf-C5HC2
ZZ_ADA2
Motif
Other DBs
NCBI-GeneID:
102525653
NCBI-ProteinID:
XP_031538373
LinkDB
All DBs
Position
11
AA seq
2032 aa
AA seq
DB search
MAVETRPELVGKRFLCVAVGEEVRPELGDSGRCWRSWRAGVIRAVSHRDSRNPDLAVYVE
FDDLEWDKREWVKVYEDFSTFLVEYHLIWARRNDPRQTQGSKSKQIQWPALTFKPLVEKS
VPSSITAVEFLVDKQLDFLTEDSAFQLYQDDIDSLNPVLRDNAQLQEEVKVWVKEQKVQE
IFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLLTRTMVVMNDQVLEPQNVDPSMVQM
TFLDDVVHSLLKGENIGITSRRRSRASQNSNTVHGHYTRAQANSPRPAMNSQAAVPKQNS
HQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKNKQVMNKRRKPEEDEKKL
NMKKLRTDNVSDFSESSDSENSNKRMINNSSEQKPENELKNKNTSKINGEEGKSQNNEKA
GEETLIDCQSCWDQIQEDKKHEETEKQKSVDSHLQEKMIIHSSEQATLSDHDSNDLLLQE
CNKEKLHTVELLPKENFVSRPPTPKCVIDITSDSNTEKVAQENSSTFGPQTLQKMDPNVS
DSKHSIANAKYLETAKQDSDQSWVSDVVRVDLTQSNIRNASSGSDNLNMEKEKSQYVSYV
SSLSTVSVTEDKLHKRSPPPETIKSKLNTSLDAHKTKSNPSPEVVKPKINHSPDSVKPKA
TYVNSQTAGERRLANKIDHEISRCSFHPVPTRGSTLETTKSPLIIDKNEHFTVYRDPALI
GSETGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTINTH
PLTSGPHHSVHHPHLLPTVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQLLQHP
SPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPPSKWVHPENAVNAESSLRRNS
PSPWLHQPTPVTSTDGIGLLSHIPVRPSSAEPHRPLKITAHSSPPLTKSLVDHHKEELER
KAFIEPLRSIASTSAKNDLDLNRSQTGKDGHLHRHFVDPVLNQLQRPPQETGERLNKYKE
EHRRILQESIDVAPFTTKIKGLEGERDNYSRAAASSSSPKSHVIKQDKDVECSVSDLYKM
KHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQSNTLGAAANPQTLTSFIS
SLSKPPPLIKHQPESEGLVGKIPEHLSHQIASHSVTTFRSDCRSPTHLTVSSTNTLRSMP
ALHRAPVFHPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDTQ
ANFKSSSEQSLTEMWKSNNNLSKEKAEWHVEKSSGKSQAAMASVIVRPPSSTKIDSMPAM
QLASKDRVSERSSTGANQTDCLKPAEAGETGRMILPSVNSDSAHIKSEKNFQAVSQGSVP
STVMSAVNTMCNTKTDIFTSAATTTSVSSWGGSEIIYPLSNTILASKSLECTSTKSVSHS
VTQTQECRVSTTAPVTPASSKTGSVVQTSSGFSGTTDFIHLKKHKAALAAAQYKSSNVSE
TEPNAAKNQTSSASPLLDGTVVCSTINKANSVGSGQASQTSQPNYHTKLKKAWLTRHSEE
DKNTNKMENSGNSVSEIIKPCSVNLIASTSNDIQSSVDSKIIVDKYVKDDKVNRRKAKRT
YESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRSAKEK
SKLKLQSSSNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSK
KGEEPAHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDELDIE
TSKYILDIIGDKFCQLVTSEKTALSWVKKDVKIAWKRAVRGVREMCDACEATLFNIHWVC
QKCGFVVCLDCYKGKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAM
HTLREKYGIKSHCHCTNTENIQVGNFSAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQ
KSESNGNSSPGSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKRKQRICP
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctgtgcgtggcggtcggc
gaagaggtgcggccggagctcggggacagcggacgctgctggcggagctggcgagcgggg
gtcatccgagctgtgtcacatagggacagccgcaatccagacctggcggtgtacgtggaa
tttgacgatcttgaatgggataaacgagagtgggttaaagtttatgaagatttttcaacc
ttcttggtggaataccacttaatctgggccagaaggaacgaccctagacagactcaggga
tcaaagagcaaacagattcagtggcctgcattgactttcaaacctttggttgaaaaaagt
gtgcccagttcaatcactgcagtagaattccttgtagataaacaattggattttttaact
gaagatagtgcctttcagctgtaccaggacgacatagacagcctaaacccagttctcagg
gacaacgcgcaacttcaggaagaagtgaaagtctgggtaaaggaacaaaaagttcaggag
atttttatgcaaggtccttattccttgaatggatacagagtgagggtatatagacaagat
tctgccacccagtggtttactggcataattactcatcatgatctcctcactcgcaccatg
gtcgttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatg
acctttctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacgtca
cggcgaaggtctcgtgccagtcaaaatagcaacactgttcacggtcattatacacgtgct
caagcaaatagtcccagaccagcaatgaactcccaagctgctgtaccaaaacagaattca
caccagcaacaaagaaatattcgtccaaataagaggaagggctcagatagcagtatacca
gatgaagagaaaatgaaggaggaaaaatatgattatatagcacgaggagaaaatcctaaa
ggtaaaaacaaacaggtgatgaacaaaagaaggaaacctgaggaggatgaaaagaaacta
aatatgaaaaaactacgaactgacaatgtttcagacttttctgagagcagtgactcagaa
aattcaaataagagaatgataaataattcctcagagcagaagccagaaaatgagttgaaa
aataaaaatacttcaaagataaatggagaagaaggaaaatcccagaataatgagaaggca
ggagaagagacactaatagattgccagtcttgctgggatcaaatacaggaagataaaaaa
catgaagaaacagagaagcagaagtctgttgactctcatcttcaagaaaaaatgattatc
cattcatcagaacaggccacactttctgatcatgattctaatgatttgcttcttcaggaa
tgcaataaggaaaaactacatacagtggaattattaccaaaggagaactttgtatccaga
ccacccacaccaaaatgtgttattgatattacgagtgactctaatactgaaaaggtggct
caggaaaactcaagtacctttggccctcagacacttcagaaaatggatcctaatgttagt
gattcaaaacattcaattgcaaatgcaaaatacttggaaacagcaaaacaagattctgac
cagagctgggtcagtgatgtggttagagtagatttaacacaatcaaatattaggaatgct
tcttcaggaagtgataacctgaatatggaaaaagagaaaagtcaatatgtctcttacgta
tcttctctgagtacagtttctgtcacagaagataagctgcataagcgaagtccaccccca
gaaactataaaatctaaacttaatacttcattagatgctcacaagacaaaatccaatccc
tcacctgaagttgttaaacctaaaattaaccattctcctgattctgtaaagcctaaggcc
acttatgtgaacagccaaactgctggtgaaagaagactggcaaataagatagatcatgag
atatcaagatgcagttttcatccagttcctactcgaggcagtacattagaaactacaaag
agccctctaatcattgataaaaatgagcatttcacagtttacagagatcctgcacttatt
ggatcagaaacaggagctaatcacatttcacctttcttaagccagcatccctttcctctt
cactcttcatcccatagaacatgtttaaatccaggtacccatcaccctgccttaactcct
gcaccccatttactggctggatcatccagtcaaactccattacctaccattaatactcac
cctctgactagtggtccacaccattctgttcatcatcctcatttacttcctactgtgtta
cctggagtgcctactgcctccttacttggtggccacccacgactagagactgcacatgcc
agcagcttgagccacttagcactagcccaccagcaacagcaacagttattacagcaccca
tcacctcatcttcttggacaagcccatccttctgcttcatataatcagcttggactttat
ccaattatttggcaatatccaaatggaacacatgcgtactcaggacttggtctgccacct
tctaagtgggttcacccagaaaatgcagttaatgctgaatcctcattaaggaggaattct
cccagtccttggttacatcagcctacacctgtgacctcaacagatggtatcggattactt
agtcacattcctgtcagaccttctagtgcagagcctcatcggcctcttaaaattacagca
cattccagtccaccattgacaaaaagtttagtagatcatcataaagaagaattggagaga
aaagcttttattgaaccattacgttctattgcatccacatcagcaaaaaatgacctggat
ctaaataggtcacagactggaaaagatggtcacttgcataggcattttgtggatcctgta
ttgaatcaattacagagaccaccccaggagactggagagagattaaacaaatataaggag
gaacaccgtcgaattcttcaagaaagtattgatgttgctccctttacaactaaaatcaag
gggcttgagggtgagagagataattattctagagcagcagcatcgtcttctagccctaaa
agccatgtcatcaaacaagacaaagatgtagaatgctcagtatctgatctttataaaatg
aagcactcagtgcctcagagtttaccccaaagtaactatttcactacattgtctaatagc
gtagtcaacgaaccaccaagatcatatccatccaaagaggtttcaaatatttacactgaa
aaacagagtaatacccttggagcagcagctaatcctcaaactctgacttcatttatatca
tctctttcaaagcctccccctttgattaaacaccagccagaaagtgaaggtttagtaggc
aaaataccagagcatctttctcatcaaattgcttctcactcagtaacaactttcagaagt
gattgtaggagtcctactcatctgacagtttcttctacgaatacactccggagtatgcct
gctttacatagagcaccggtatttcacccaccaatccatcatagcctggaaagaaaagaa
agcagctatagtagcctttcccctccaactttaactcctgtgatgcctgtaaatgctggt
gggaaagttcaagaatcacaaaagcctccaactctgattcctgagccaaaagacactcag
gcaaattttaagagttcttctgaacagagtttgacagaaatgtggaaatctaataataac
ctcagcaaagagaaagctgaatggcatgtggagaaaagcagtggaaagtcacaggctgct
atggcatctgtcattgtacgtccaccttctagtacaaaaattgatagcatgccagcaatg
cagttagcttccaaagatcgagttagtgaaagatcttcaactggggcaaatcaaacagat
tgcctaaaaccagcagaagctggagagactggaagaatgattctgccaagtgtgaattca
gacagtgctcacataaaatctgaaaaaaactttcaggctgtctcacagggcagtgttccc
agtacagtcatgtctgctgtaaacacaatgtgtaataccaaaacggatatattcacatct
gctgccactaccaccagtgtttccagctggggtggttcagaaataatttaccctttatcc
aataccattttggcctctaaatccttagaatgtacctctacaaaaagtgtcagtcattca
gtgactcaaacacaagaatgcagggtcagcaccacagctccagttacaccagccagtagt
aagacaggaagtgttgttcagaccagctctgggttctcaggcacaactgattttatccat
ttgaaaaagcacaaggcagcattggctgcagctcagtataaaagtagtaatgtcagtgag
accgagcctaatgctgcgaaaaatcagacatcgtcagcctcccctctcttggatggcact
gtggtctgtagtacaataaacaaagcaaactctgtaggaagtgggcaagcatcccagaca
agtcaaccaaactaccacactaaactgaaaaaggcctggcttacaagacattcagaagaa
gataaaaatactaataaaatggaaaattcagggaattctgtatcagaaattattaagcca
tgttctgtcaatttaatagcctctacatctaatgatatacaaagtagtgtagatagtaag
atcatagttgataagtatgtaaaagatgataaagtcaataggagaaaagccaaaagaact
tacgaatctggctctgaaagtggagattcagatgaaagtgaaagcaaatcagagcaaagg
actaaaaggcagcctaagccaacttacaaaaagaagcagaatgatcttcagaagagaaaa
ggtgaaatagaagaagatttaaagcccaatggtgttctcagcaggagtgccaaagaaaaa
agtaaattgaagttgcagagcagcagtaatagtgctggcatccctcgttcagtattaaaa
gattggcgtaaagtcaagaagctgaagcaaactggggaatcctttttacaggatgactct
tgctgtgagatagggcctaatttgcagaagtgccgagaatgtagacttattcggagtaaa
aagggagaagaaccagctcattcaccagtattttgtagattttactactttagacgatta
tcatttagtaaaaatggagtggttagaatagatggcttctcttctcctgaccaatatgat
gatgaagctatgagtttatggacacatgaaaattatgaagatgatgaactagacatagaa
acttcaaaatacatcttggatataataggtgataagttctgtcagttggtaacgtctgaa
aaaacagctttatcctgggtgaaaaaggatgtcaaaattgcctggaaaagagcagtgaga
ggagtccgggagatgtgtgatgcatgtgaagcaacattatttaacattcattgggtctgc
caaaaatgtggatttgtggtctgcttagattgttacaaaggaaaagaaaggaagagttct
agagataaagaactatatgcttggatgaagtgtgtgaagggacagcctcatgatcacaaa
catttaatgccaactcaaattatacccggttctgttttgacagatcttctagatgcgatg
cacacacttagagaaaaatatggtattaaatcccattgtcattgtactaacacagagaat
atacaagttggaaatttttctgctatgaatggtgtgtctcaagttttacagaatgttctt
aatcacagtaacaaaatttctctgtgcatgcctgagtctcagcagcaaaatacccctcag
aagtctgagagtaatggcaacagcagcccagggagtgatgtaagcacagacagcaagcta
actcctccagaatcccagtcaccactgcattggttagcagatcttgcagagcaaaaggct
agagaggaaaaaaaaagaaaacaaagaatttgcccttga
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integrated database retrieval system
