Vicugna pacos (alpaca): 102525656
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Entry
102525656 CDS
T08098
Symbol
PSMC4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
KO
K03063
26S proteasome regulatory subunit T3
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03050
Proteasome
vpc05010
Alzheimer disease
vpc05012
Parkinson disease
vpc05014
Amyotrophic lateral sclerosis
vpc05016
Huntington disease
vpc05017
Spinocerebellar ataxia
vpc05020
Prion disease
vpc05022
Pathways of neurodegeneration - multiple diseases
vpc05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
102525656 (PSMC4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
102525656 (PSMC4)
09164 Neurodegenerative disease
05010 Alzheimer disease
102525656 (PSMC4)
05012 Parkinson disease
102525656 (PSMC4)
05014 Amyotrophic lateral sclerosis
102525656 (PSMC4)
05016 Huntington disease
102525656 (PSMC4)
05017 Spinocerebellar ataxia
102525656 (PSMC4)
05020 Prion disease
102525656 (PSMC4)
05022 Pathways of neurodegeneration - multiple diseases
102525656 (PSMC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
vpc03051
]
102525656 (PSMC4)
Proteasome [BR:
vpc03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
102525656 (PSMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_lid_3
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_3
IstB_IS21
AAA_7
TsaE
AAA_18
AAA_33
Parvo_NS1
AAA_lid_PRS2_C
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
102525656
NCBI-ProteinID:
XP_006215085
UniProt:
A0A6I9IK48
LinkDB
All DBs
Position
11
AA seq
418 aa
AA seq
DB search
MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggagataggcatcctggtggagaaagctcaggatgagatcccagccctgtctgtg
tcacggccccagactggcctgtccttcctggggcctgagcctgaggacctggaggacctg
tacagccgctacaagaagctgcagcaagagctagaattcctggaggtgcaggaggagtac
atcaaggatgagcaaaagaacctaaagaaggaattcctccatgctcaggaggaggtgaag
cgaatccagagcatcccactggttatcgggcagtttctggaggctgtggatcagaataca
gccatcgtgggctctaccacaggctccaactactacgtgcgcatcctgagcaccattgat
cgggagctgctcaagcccaacgcctcggtggccctccacaagcacagcaatgccttagtg
gatgtgctgcctcctgaggctgacagcagcatcatgatgctcacctcagaccagaagcca
gacgtgatgtatgcggacatcgggggcatggacatccagaagcaggaggtgcgggaggcc
gtggagctcccgcttacgcacttcgaactctacaagcagatcggcattgaccctccccga
ggcgtcctcatgtatggcccgcctggctgcgggaagaccatgttggcaaaggctgtggct
catcatacgacagctgcatttatccgggtcgtgggctcggagtttgtacagaagtacctg
ggcgagggcccccgcatggtccgggacgtgttccgcctggccaaggagaacgcgcctgcc
atcatcttcatagatgagattgatgccatcgccaccaagagattcgatgcccagactggg
gctgacagggaagttcagagaatcctgctggagctactgaatcaaatggatggatttgac
cagaatgtcaatgtcaaggtgatcatggccacaaacagagcagacaccctggatcctgcc
ctgctacggccaggacgccttgaccgtaaaattgaatttccactccctgaccgccgccag
aagagactgattttctccactatcaccagcaagatgaatctttctgaggaagttgacttg
gaagactatgtggcccgaccagataagatttcaggagctgatattaactccatttgtcaa
gagagtggaatgttggctgtccgtgagaaccgctacattgttctggccaaggactttgag
aaagcatacaagacggtcatcaagaaggacgaacaggagcatgagttttacaagtga
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integrated database retrieval system
