Vicugna pacos (alpaca): 102525666
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Entry
102525666 CDS
T08098
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vpc03041
]
102525666 (DDX20)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102525666 (DDX20)
Spliceosome [BR:
vpc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
102525666 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
102525666
NCBI-ProteinID:
XP_031536158
UniProt:
A0A6J3ARM3
LinkDB
All DBs
Position
9
AA seq
669 aa
AA seq
DB search
MEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSVRLFILDEADKL
LEEGSFQEQINWIYSSLPANKQMLAVSATYPEFLANALTKYMREPTFVRLNSSDPSLIGL
KQFYKLVNSYPLAHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPA
ECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHR
IGRAGRFGTLGLTVTYCCRGEEENTMMKIAQKCNINLLPLPDPIPPGLMEECLDWDVEVE
AAMHTYGLASIPPQPLNQQIQKIERTFETQKTYGNHMASSRNTSVSALSVKSKNNTKQKL
PVKSHSECGIVEKAKSPKELGCAIKLEEQMKNSVQISVENSANNQHQVKEASVSLPTIPC
LSSFKIRLPCPLTFAELVEDYEYFVKEGLEKPVEIIRHYTGPGDQTVNPQNGFVRNRITE
ERAQILASSSQSGDSESDSGSYSSRTSSQSKGNKSHVEGSSDTQLKDSEPLPGDGQIFLE
QPLNEGDTPNLAEYQESPEIQIKARHKEGANHNQRVKQSRRNLPKRSSYRLQTEPQEDGW
YDCRGEAHPSFSDTYQDYEEYWRAYYRAWQEYYAAASQSYYWNAQRHPGWVAAYHMNTIY
LQEMMRGNQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcttagagtgtcatgtgtttattggagggactccattatcacaagacaaaacc
agacttaaaaagtgtcatattgccgttggttctcctggcagaattaaacaactgatagag
cttgactacttgaacccaggcagtgtacgtctctttattcttgatgaagcggataagctt
ttagaagaaggcagcttccaggagcaaataaattggatttattcttccttacctgccaat
aaacagatgttggcggtatcagctacttaccctgaatttttggctaatgctttgaccaag
tacatgagagagcccactttcgtaagactgaattccagtgatccaagtctcataggtttg
aagcagttttacaaacttgtcaactcataccctttggcccataagacttttgaggaaaag
actcagcatttacaggaactgttcagcaaaattccatttaatcaagccttagtcttttct
aatctacacagcagagcacaacatttggctgatatcctttcttctaaaggctttcctgcc
gagtgcatttcaggcaacatgaatcagaatcagcgtcttgatgctatggctaaactgaag
cagtttcattgcagagtcctcatttctacagatttgacttcccgtgggattgatgctgag
aaggtgaatctggttgtaaacctggatgtaccactggactgggagacatacatgcatcgg
attggcagagctggccgttttggtactttgggactgacagtgacctactgctgcagggga
gaagaagaaaatacgatgatgaaaattgcccagaaatgtaatatcaaccttctgccttta
ccagatcctattcctcctggtctgatggaagaatgtttggattgggatgtggaggtcgaa
gctgccatgcatacatatggcttagcaagtatacctccccagcccctaaatcaacaaatt
caaaaaatagagagaacctttgaaactcagaaaacttatggtaaccacatggcttcatct
agaaatacttctgtgtctgcactatcagtcaaatcaaaaaataataccaaacaaaagctt
cctgtgaaaagccactcagagtgtggaattgtagagaaagcaaagtcgccaaaagagctg
ggctgtgccataaaattggaagagcagatgaagaattctgttcagatatctgttgaaaac
tcggctaataatcagcaccaagtcaaagaagcttctgtgtcactccccacaattccttgt
ctgtcttcctttaaaatccgtctgccatgccctttgacttttgcagaattggtggaggat
tatgagtactttgttaaagaagggttagagaaacctgtggaaatcatcagacactacaca
ggccctggggatcagactgtgaatcctcagaatggtttcgtgagaaacagaatcactgaa
gagagagcacagatactggcaagtagtagccaatctggagactctgagagcgacagtggt
tcttacagctcaaggacttcttcccagagcaaaggaaataagtcacacgtggaaggctct
tctgatactcagctgaaggactcggaacctcttcccggggatggccagatctttttggaa
caacctctgaatgaaggtgacacccctaatctagcagagtatcaggaatcgcctgaaatc
caaataaaggccaggcataaagagggggctaaccacaaccagagagttaagcagagccgg
agaaaccttcccaagcggtcctcctatcgactgcagacagaaccgcaggaagatggctgg
tatgactgccgtggggaagcacatccgagtttctcagatacctatcaggactatgaggag
tactggagagcttactacagggcctggcaggaatactatgctgctgcttctcagtcgtat
tattggaatgctcagaggcacccaggctgggtggcagcctaccacatgaacaccatttat
ctacaggagatgatgcgcggcaaccagtga
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