Vicugna pacos (alpaca): 102525675
Help
Entry
102525675 CDS
T08098
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpc03016
]
102525675 (TSEN34)
Enzymes [BR:
vpc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
102525675 (TSEN34)
Transfer RNA biogenesis [BR:
vpc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
102525675 (TSEN34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
102525675
NCBI-ProteinID:
XP_015107620
UniProt:
A0A6J0B495
LinkDB
All DBs
Position
11
AA seq
270 aa
AA seq
DB search
MGCGVWRKQRVARNVGGGSAGTAMTLVSAPRPDPRQHSLALASFKRQQEQGFQEQSALAA
EARETRRQELLEKIAEGQAAKKQKLEQESGTSGSQEPSGNQAAEENEASASQAAGEHEEA
GEGSSSPQPGPSNGVAPLPRSALLVQLATARPRPIKARPLDWRVQSKDWPHAGRPAHELR
YSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPGDPIPLQDLVSAGRL
GTSVRKTLLLCSPQPDGKVVYTSLQWASLQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcggggtgtggaggaagcagcgcgtggcgcgcaacgtagggggtggctccgcc
gggactgcgatgaccctggtcagcgccccgcgcccggatccccgccaacacagcctggca
ttagcatccttcaagcgccagcaggagcagggcttccaggagcaaagtgctctggcagct
gaagcccgtgagacccgtcgtcaggagctcctagagaagattgccgagggccaggctgcg
aagaagcagaagctggaacaggaatcagggaccagtgggagccaggagcccagtggaaac
caagctgcagaagagaatgaggccagtgctagccaggctgctggggagcatgaagaagca
ggtgaaggctcctcctctccccaaccggggccttcaaacggagtggcccctttgcccagg
tctgctctgctcgtccagctggccactgccaggcctcggcccatcaaggctaggcccctg
gactggcgtgtccagtccaaagactggccccatgctggccgccctgcccacgagcttcgc
tacagcatctacagggatctgtgggagcgaggcttcttcctcagcgctgccggcaagttc
gggggcgacttcctggtctatcctggcgacccactccgtttccatgctcactacatcgct
cagtgctgggctcctggggaccccatcccactccaggacctggtttctgctggccgcctg
ggaaccagtgtcaggaagacgctgctcctgtgctctccgcagcctgatggtaaggtggtc
tacacgtccctgcagtgggccagcctgcagtga
DBGET
integrated database retrieval system
