Vicugna pacos (alpaca): 102525712
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Entry
102525712 CDS
T08098
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102525712 (BTAF1)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102525712 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
TPR_Trm732_C
Cnd1
UTP20
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
102525712
NCBI-ProteinID:
XP_006211102
UniProt:
A0A6I9IHZ6
LinkDB
All DBs
Position
11
AA seq
1849 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSTNWDTRI
AAGQAVEAIVKNVPEWNPVPRTRQETPSESAMEDSSTTDRLNFDRFDICRLLQHGASLLG
SAGAEFEVQDEKSGEVDPKERIARQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPTS
AALVNKQPTLQAAELIDSEFRTGMSNRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDG
EPEEKRRKIANVVINQSANDSKVLIDNIPDNSPLIEETNEWPLESFCEELCNDLFNPSWE
VRHGAGTGLREILKAHGKSGGKIGDSTLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVS
DEVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVR
QDVINTLLPKVLSRIIEGLQDLDDDVRAVAAASLVPVVESLVYLQTQKVPFIINTLWDAL
LELDDLTASTNSIMTLLSSLLTYPQVQQCSIHQSLTVLVPRVWPFLHHTISSVRRAALET
LFTLLSTQDQNSSSWLIPILPDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQYVV
AAACPWMGAWLCLMMQPSHLPIDLNMLLEVKARAKEKTGGKVRQGQSQSKEVLQEYIAGA
DTIMEDPATRDFVVMRARMMAAKLLGALCCCICDPGVNVVTQEIKPAESLGQLLLFHLNS
KSALQRISVALVICEWAALQKECRAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQ
LISSLADAHIEVGNRVNNSVFTIDQANDLVTTVFNEVTSSFDLNPQVSQQLDSKRQQVQM
TVTETNQEWQVLQLRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQC
IAKLLQQCTTRTPCPNSKIIKNLCSSLCVDPYLTPSVTCPVPTQSGQENSKGSNSEKDGM
HHTVTKHRGIITLYRHQKAAFAITSRRGPTPKAVKAQIADLPAGGSGNILVELDEAQKPY
LVQRRGAEFALTTIVKHFGGEMAVKLPHLWDAMVGPLRSTIDINNFDGKSLLEKGDGSAQ
ELVNSLQVFETAAVSMDSELHPLLVQHLPHLYMCLQYPSTAVRHMAARCVGVMSKIATME
TMSIFLEKVLPWLGAIDDNIKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTD
SVRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFLEQLLDGKKLENYKIPV
PINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSK
LAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIV
ASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNV
LELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFL
LRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSAALSEETEKP
KLKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLAVQNSSLHDIQHAPKLSALK
QLLLDCGLGSGSTSESGTESVVAQHRVLIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGS
IPPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRA
HRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTL
DKDGKAEKADTSTSGKASMKSILENLSDLWDQEQYDSEYSLENFMHSLK
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccaggcttgaccgtctttttatcctactggatactggcactactccagtt
acaagaaaagctgctgcacagcaacttggagaagtggtgaagcttcatccccatgaacta
aataatctcttatctaaagtgttgatatatttaaggagtacaaattgggatactcggatt
gcagcaggacaagctgttgaagctatagtgaaaaatgtacctgagtggaatccagtgcca
agaaccagacaagaaactccttcagaaagtgctatggaagattcatctactacagatcga
ttgaattttgacagatttgatatatgtagattgttacaacatggggcatcacttttggga
tctgctggtgcggaatttgaagtacaagatgaaaagtcaggtgaagtggatcctaaagag
aggatagcacgccagcgaaaactattacagaagaaacttggccttaatatgggagaagcc
attggaatgagcactgaagaactcttcaatgatgaagatttggattataccccaacttca
gcagcccttgtaaacaaacaacctactctccaggccgctgaattgattgactcagagttt
cgaacaggaatgagcaatagacaaaagaacaaagctaaaagaatggccaagttatttgca
aagcagagatccagggatgcagtggaaactaatgagaagagcaatgatagcactgatggg
gaaccagaagaaaagagacgaaaaatagcaaatgttgttattaatcagtctgcaaatgat
tccaaagtcctgattgataatattccagacaattctcccttaattgaagagacaaatgaa
tggcctttggaaagcttttgtgaagaactttgcaatgatctttttaatccctcctgggag
gttcgacatggtgcaggcactggacttagggaaatccttaaagctcatgggaaaagtggt
ggtaaaataggagacagcactttagaagagatgattcagcagcatcaagagtggttggaa
gacttggttattagacttctttgtgtgtttgcattggacaggtttggagactttgtttct
gatgaagttgtggcaccagttcgtgaaacttgtgctcaaacattaggtgtggtgttaaaa
cacatgaatgaaacaggagttcataagactgtggatgtgctacttaaattacttacacaa
gaacagtgggaagttagacatggtggtctgctaggaataaaatatgctttggcagttcgt
caggatgtaattaatactttattgcctaaagttttaagtagaataattgaaggactccag
gacctcgatgatgatgtcagagctgttgctgcagcatcgttagtacctgtggtagaaagc
cttgtgtatcttcagacacaaaaagtacccttcattataaatacattatgggatgctctt
ttggaactagatgatctaacagcttcaacaaatagtattatgactcttctttcatctttg
ttaacttatcctcaggttcagcaatgcagtattcatcagtcactcacagttttagttcca
cgtgtctggccttttttgcatcacactatatcatcagttcgaagagcagcgttggaaact
ctgttcacgttattatcaacacaggaccagaactcttcatcttggcttatacctatcctt
cctgatatgcttcgacacatttttcagttctgtgttttagaaagcagccaggaaattctg
gacctcattcacaaggtttggatggaattgttgagcaaggcttcagttcagtatgtggta
gcagctgcttgtccatggatgggtgcttggctttgtttaatgatgcagccttctcattta
cctattgatttaaatatgttgctggaagtaaaagctagagccaaggaaaaaacaggtggt
aaggtgcgccaaggccaaagccagagtaaagaagtacttcaggagtacattgcaggtgca
gataccatcatggaagatcctgccaccagagattttgtagttatgcgggccagaatgatg
gcagccaagttgttaggagcactgtgttgctgtatttgtgatccaggtgtaaatgtggta
acccaagaaattaaaccagctgaatcccttggccagttactactcttccatttgaactcc
aagtctgccttacagagaattagtgtagctttggtaatctgtgaatgggctgctttacag
aaggagtgtagagctgttaccctagccgtgcagccacgtttacttgatatcctttcagaa
catttatattatgatgaaattgccgttccattcacacgaatgcagaatgagtgtaaacag
cttatttcatcattagctgatgcacatattgaagttggtaatagagtaaacaacagtgtt
tttacaatagatcaagctaatgatctggtcactactgtttttaatgaagtcacatcatct
ttcgatttaaatcctcaagtgtcacagcagttagatagtaaacgacagcaggtccaaatg
acagttacagagaccaaccaggagtggcaagtgttgcagttgagagtgcataccttcgct
gcatgtgcagttgtgagcttgcagcaacttccggagaaattaaatcctattataaaacca
ttaatggagacaattaaaaaagaagagaataccctagtgcaaaactatgcagctcagtgc
atagccaaactacttcagcagtgtacaacaaggacgccctgtcccaattcaaaaattatt
aaaaacctctgtagctcactttgtgtggacccatatctaactccttctgtcacatgtccg
gtaccaacacaaagtggccaggaaaattctaaagggtctaactccgaaaaagatggaatg
catcatactgtcaccaagcacaggggtataattacactctataggcatcagaaagctgct
tttgctatcacaagtaggcgaggtcctacccccaaagcagtaaaagctcaaatagcagat
cttcctgcaggaggtagtggaaatatccttgttgaacttgatgaggcccagaagccttac
ctggtacaaaggagaggagctgaatttgccttgacaactatagtgaagcattttggtggt
gaaatggcagtgaagttgccacatctctgggatgctatggttggtccattgaggagtaca
atcgacataaataattttgatggaaagtccctcctggaaaagggagatggctctgcccaa
gaattggtgaattctctgcaagtttttgaaacagcagcagtgtcaatggattctgagctt
catcccttgttggtacagcatttgcctcatctttatatgtgccttcagtaccccagcact
gcagtgaggcacatggctgctcgttgtgtgggggtcatgagcaaaatagctaccatggaa
acaatgagtatttttttggagaaggttcttccatggctaggagctattgatgacaatatc
aaacaagagggtgcaattgaagcacttgcctgtgtaatggaacaactggatgttggtatt
gttccatatattgtccttttagttgtgcctgttctaggaagaatgagtgatcagacagac
agtgtaagattcatggctacacagtgctttgcaacactaattagactcatgccacttgag
gcaggcattccagaccctccaaatatgtcagaagaattaatccaattgaaagccaaggag
cgacactttttggaacaattgctagatgggaaaaaattagaaaactacaaaattccagtg
ccaatcaatgctgaactcagaaagtatcagcaggatggtgtgaactggttagcatttctt
aataagtataagcttcatggaattctatgtgatgacatgggtttaggaaaaactttacag
tccatctgcattctagcaggagatcattgtcacagggcccaggaatatgcaagatcaaaa
ctggcagaatgtatgccacttccttccttggtggtttgtccgccaacattaacaggtcat
tgggtggatgaagtaggtaaattttgctccagagaatatctcaatccgttgcattatact
gggcctcccactgaaagaataaggttacaacatcaagtgaaaaggcataatctgatagtg
gcttcatatgatgttgtgaggaatgacatagatttcttcagaaatattaaatttaactac
tgtattcttgatgaaggccatgtcatcaaaaatggaaaaacaaaattgtcaaaagcagta
aaacaactgactgctaattataggattattctttctggaacaccaatccagaacaacgtt
ttggaactgtggtcattatttgatttcctcatgccaggatttttggggactgaacgccag
tttgctgctcgatatggtaaacctatattagcaagtagagatgctcgaagctccagtcga
gagcaagaagcaggtgttctcgcgatggatgcactgcaccgccaagtcctgccatttctt
ttgagaagaatgaaagaagatgttttgcaggatctaccacccaaaattattcaagactat
tactgtactcttagtcctctccaggttcagctctatgaggattttgctaagtctcgtgcc
aagtgtgatgttgatgaaacagtttcttcagctgcactttctgaagaaactgaaaaacca
aagcttaaagctacaggccatgtattccaggcattacagtacttacgtaaactgtgcaac
catccagcattagtcttaacacctcagcatccagagttcaagagtactactgaaaaactg
gcagttcagaattcttctcttcatgatattcaacatgcccctaaactctcagctttgaaa
caattgctgttggactgtggtttgggaagtggcagcacttctgagagtggcacagagtct
gtcgtagcccagcacagggtactgatcttctgtcagcttaaaagcatgcttgatatagta
gagcatgatctcctcaagcctcacttaccctcggtcacttacttgagattagatggcagc
atacctcctggtcagaggcattccattgtttcacggtttaacaatgatccatccatagat
gttctcttacttacaactcacgttggtggcctggggcttaacctaacaggtgctgacacg
gtcgtatttgttgagcacgactggaatcctatgcgtgatctacaagccatggaccgggcc
catcgcattgggcagaaacgtgtggttaatgtctaccgattgataaccagaggaacattg
gaagagaagataatgggtttgcagaaattcaagatgaacatagcaaatactgttattagc
caagagaattctagtttacagagcatggggacagatcaactccttgatctgtttactctt
gataaggatggcaaagcagagaaagctgacacctctacttctggaaaagcaagtatgaaa
tcaattcttgaaaacctgagtgatctttgggatcaagagcaatacgattcagagtatagc
ctggaaaattttatgcattctctcaaataa
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integrated database retrieval system
