Vicugna pacos (alpaca): 102525780
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Entry
102525780 CDS
T08098
Name
(RefSeq) protocadherin beta-17
KO
K16494
protocadherin beta
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
102525780
Cell adhesion molecules [BR:
vpc04515
]
Cadherins
Protocadherins
102525780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PylC-like_N
Big_9
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
102525780
NCBI-ProteinID:
XP_031526887
UniProt:
A0A6J3A0S1
LinkDB
All DBs
Position
3
AA seq
958 aa
AA seq
DB search
MMGMPVPKATQKRQVTTIIILLLLWDVGGVIIKYSVLEERDSGSFVANLAKDVGLGLGEL
AARGARILSKGNKQYLELEQKSGNVFLKDKLDREELCGDTDPCIVHFQVLLKNPVQFIQG
ELQLQDINDHAPEFLENEIVLKISESSQPGTAFPLKIAQDLDVGSNTVQNYTISTNFHFH
LFTRNHSDSRKYPELVLDKELDREEQPELRLTLTALDGGSPPKTGTSQVLILVLDINDNA
PEFARQLYEVQVPENSLIGSLVITVSARDLDAGTYGELSYSFFQSSNQVIQAFELNTVTG
DIRLKKQLDFEEIRSYHMEIEASDGGGLSGKCTVAIEVTDVNDNVPELTVSLLISDIPEN
TPDTVVAIFGISDPDAGDNGKMMCSIQEHLPFLLKLTVENFYTLVTEGPLDRESKAQYNI
TITVTDMGTPRLKTQHNITVLVSDVNDNAPAFTQASYTLRVPRILETLMEARVVRAVQKR
QVLFLCVFLGVSWAGAEQLRYFVEEETERGTFLANLANDLGLGVGELSARGPRIVSDQNM
RFLLLDPLTGHLRLNEKLDREELCGPTEPCVLPFQLLLEKPLQIFRAELWVRDINDHSPV
FLDREITLKILESTTTGAAFLLESAQDSDVGTNNLRNYTISPNAYFHITVHDSGEGIIYP
ELVLDRVLDREEVPELTLTLTALDGGSPARSGTALVRILVLDINDNIPEFVQSLYKVQVP
ENSPVGSLVVTVSARDLDTGSNGEIVYAFFYATERILKTFRINPTSGNLHLKAALNYEEM
QTYTLTIQAKDGGGLSGKCTVMVQVTDINDNPPELLMSSFTSPIKENSPETVVAVFRIRD
RDSGNNAKTVCSIPDDLPFVLKPSVENYYTLVTKSPLDREKRVEYNITITVTDLGTPRLK
TEHNITVLVSDVNDNVCLTGDSGTSEFKFLKPIIPNLASQSIGREVEEYPSYRNDSSF
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgatggggatgccagtacccaaagcgacacagaaaaggcaagtgaccaccattattatt
ctattactattgtgggatgtgggtggtgtgatcattaaatattccgttctagaagagagg
gacagcggctcatttgtggccaatctagcaaaagatgtcgggttgggcttaggggaactg
gccgcgcggggcgcccggattctttccaaagggaataaacagtatttggagctcgagcag
aagagtgggaacgtgttcctaaaagataaattggaccgggaagagttgtgcggtgacaca
gatccctgtatagtgcatttccaggtgttactgaaaaacccagtgcagtttattcaaggt
gaattacagctccaagacataaatgaccatgccccagaattcttggaaaatgaaatcgtc
ctgaaaatctcagaaagcagccagccagggactgcatttcctttgaaaatagctcaagat
ttagatgtgggaagtaacacagttcagaactacacaattagcaccaacttccatttccac
cttttcactcgaaatcatagcgatagcaggaaatacccagagctggtgctggacaaagaa
ctggaccgtgaggagcagccagagctcaggttaaccctcacggcgctggatggtgggtca
ccgcccaagactgggacttcccaggttctcatcctggtcctggacataaatgacaatgct
cctgaatttgctcggcagctctatgaggtgcaggtcccagagaacagccttataggctcc
ctggtcatcactgtctctgctagagatttggatgctgggacctacggagagctctcctac
tcatttttccaatcctcaaatcaagtcattcaggcctttgaactaaatacagttacgggg
gatattcgattaaaaaaacagttggattttgaggaaattcgatcttaccatatggaaatt
gaagcctcagatggtggcggtctttcaggaaaatgcaccgtagctatagaagtgacggat
gtaaacgacaacgtccctgaattgaccgtgtcattactcatcagtgatatcccagaaaac
acccctgacactgtggtagctattttcggaatttcagatccagatgccggggacaatggc
aaaatgatgtgctccatccaagaacatctccccttccttctgaaacttactgtagaaaat
ttctacactttggtaacagaaggaccgctggacagagagagcaaagcacagtacaacatt
acaatcaccgtcactgacatggggactcccagactgaaaacccagcacaacataacggta
ctagtgtccgacgtcaacgacaacgcccccgccttcacccaggcctcctacaccctgcgg
gtccccaggatcctggaaacactaatggaggccagagtggtgcgtgctgtgcagaaaagg
caagtcctatttctttgtgtatttctgggagtgtcttgggctggtgcggaacagcttcgg
tattttgtggaagaggaaacagagagaggcacctttctggccaacctagcaaatgacctg
gggttgggggtgggggaactgtcagcgaggggacccagaattgtttcagatcagaacatg
cgatttttactacttgacccgcttactggtcatttacgtctaaatgagaaattagaccga
gaggaactgtgcggtcccacagagccgtgtgtgctgcctttccagttgttactggaaaag
cctcttcagattttccgtgctgagttatgggtcagagacatcaacgatcattctccagta
tttctagatagagagattaccttgaaaatattagaaagtaccactacaggggcagcattt
ctcctagaaagtgcacaggactcagatgttggaactaacaacctgagaaactacaccatc
agccccaatgcctatttccatattactgtccatgatagtggggaggggattatctatcct
gaattggttctggatagggtgctggatcgtgaagaggtgcctgagctcactttaaccctc
acagccttggatggtggctctccggccagatccgggactgccttggtacgcattctggtt
ttggacataaatgacaacatccctgaatttgtacagtctctctacaaagtgcaggtgcca
gagaatagccctgttggctccctggttgtcaccgtatcagctagagatttagatactgga
agtaatggggaaatagtttatgcatttttttatgctactgaaagaattctcaaaacgttt
cgaatcaatccaacatccggcaatcttcatcttaaagctgcactgaactatgaggaaatg
caaacttatacattaactattcaggccaaagatggcggagggctttctggaaaatgtact
gtaatggttcaggtaacagatataaatgataacccaccagaactgctcatgtcatcattt
actagcccaattaaagaaaactcacccgagacggtcgtagctgttttcaggattcgagac
agagattcagggaacaatgcaaagacagtgtgctccatcccagatgacctccccttcgtt
ctgaagccatctgtggagaattactacaccctggtaaccaaaagcccgctggacagagaa
aaaagagtcgagtacaacatcaccatcaccgtcacagatctggggacaccaaggctgaag
actgagcacaacataacagtgctggtgtccgacgtcaacgacaacgtgtgtctgacggga
gattcagggacaagcgagttcaagttcctgaagccgattatccccaatcttgcatcccag
agcataggcagggaagtagaagaatatccctcatatcggaatgattcgagtttctga
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