Vicugna pacos (alpaca): 102525886
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Entry
102525886 CDS
T08098
Symbol
TRIM52
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 52
KO
K12025
tripartite motif-containing protein 52
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102525886 (TRIM52)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102525886 (TRIM52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_10
zf-RING_5
zf-RING_6
Sina_RING
Motif
Other DBs
NCBI-GeneID:
102525886
NCBI-ProteinID:
XP_015101255
LinkDB
All DBs
Position
3
AA seq
275 aa
AA seq
DB search
MTGYASTPNPTQTLQQEAVCAICLDYLKDPLSIGCGHNLCRGCVTQLWSEEDDEEDRDVE
EDEWENEEDHEAVGAIDGWDDSIREVLHQADKLLFEDQEDDELWVGDGGIRNWDMDYVWD
QEEEEEEYXDCYLGGLRHDLRIDVYPKEDGTLEEYDEDDEELYXDTHLPPPLAPPWLFTC
PRCRQSFTRRSFRPNLXLANMVQIIHQMCPTPDKGSQGNDQGICSKHQEAFRLFCEVDKE
AICVVCXESRSHKQHSVVPLEEVVQEYKQFSNCGF
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgactggctatgcctctactcccaaccccacgcagacccttcagcaggaagcggtgtgc
gccatctgcctggattacttgaaggatcccttgtccattggctgcgggcacaacttgtgc
agagggtgtgtgacccagctgtggagcgaggaagatgacgaggaagacagggacgtagag
gaagatgaatgggagaacgaggaggaccacgaggcggtgggggctatcgatggatgggac
gattccattagagaggttttacaccaagctgacaagttgttgttcgaggaccaagaggat
gatgaactctgggtcggtgacggtggcataaggaattgggacatggattatgtgtgggac
caggaggaagaagaggaggaatatnnagactgttacctgggaggcttgagacatgacctg
agaattgacgtctaccccaaagaagatgggacattggaagaatacgatgaggacgatgaa
gagctgtatnncgacacccacctgcctcctcccctggcccctccatggctattcacctgc
ccccggtgccgccagagctttacccgtcgcagctttcgtcccaacttgtagctggccaac
atggtccagataattcaccagatgtgccccactcctgataaagggagccagggaaatgat
cagggcatctgctccaaacaccaagaagccttcaggctcttctgtgaggtggacaaagag
gctatctgtgtggtgtgttgagaatccaggagccacaaacagcacagtgtggtgccactg
gaggaagtggtgcaggagtataagcagttttcaaactgtgggttttga
DBGET
integrated database retrieval system
