Vicugna pacos (alpaca): 102526451
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Entry
102526451 CDS
T08098
Symbol
UPF2
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03013
Nucleocytoplasmic transport
vpc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102526451 (UPF2)
03015 mRNA surveillance pathway
102526451 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102526451 (UPF2)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102526451 (UPF2)
mRNA cycle factors
P-body specific factors
102526451 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Motif
Other DBs
NCBI-GeneID:
102526451
NCBI-ProteinID:
XP_031532282
UniProt:
A0A6J3AGD8
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MPAERKKPASMEEKESLLNNKEKDCSERRPVSSREKPKDEIKLTTKKEVIKVPEDKKKKL
EEDKRKKDDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEERKKQEEQVKRQQEEEAAQL
KEKEESVQLHQEAWERHQLRKEFRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGDYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKDSNKDDSKEAKEPKDNKEVPNPDDLELELENLEINDDALELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKVXLSLCNFTQAHTPS
LILHLSSGTCLAFIRSCSGSPAPAAALPTQRIFRSKMSVVLRLGNLKWEQMMRKKQAMHL
DARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRKLPW
QDQEVKDYVICCMINIWNVXYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVN
QPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNSDGSPSSLDPPEHLFRIR
LVCTVLDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPVDIDYTISDSL
ELLRPKIKLCNSLEESIRQVHALEREFLIKLGLVNDKDSKDSMTEGENLEEDEEEEEGGA
ETEEQSGNESEVNEPEEEEGSVF
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttactaaacaac
aaggaaaaagactgcagtgaaaggcggccagtgagcagcagagagaaaccaaaagacgag
atcaaacttaccaccaagaaggaggttattaaggtccctgaagataagaagaagaaactg
gaagaagataagagaaaaaaagatgacaaggaacgaaagaaaaaagaagaagaaaaggtg
aaggcagaggaggaattaaagaaaaaagaggaagaagagaaaaagaaacacgaggaagaa
gagagaaagaagcaagaagagcaggtgaaacgtcagcaggaagaggaggctgcccagttg
aaagagaaagaagaatccgttcagcttcatcaggaagcttgggaacgccatcagttaagg
aaggaatttcgtagcaaaaaccaaaatgctccagataaccggccagaggaaaatttcttt
agccgactagactcaagtttgaagaaaaataccgcttttgtcaagaagttaaaaactatt
acggaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaggctgtagcttctattgtggaagcgaagctgaaaatctctgatgtgaattgt
gctgtgcacttatgctctctctttcaccagcgctacgccgacttcgccccatcacttctt
caggtttggaaaaaacattttgaagcaaggaaagaagagaaaacacctaacattaccaag
ttaagaaccgatttgcgtttcattgcagagttgacaatagttgggattttcactgacaag
gaaggtctttccttaatctatgaacagctaaaaaatattattaacgctgaccgggaatcc
catactcatgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctgga
cttgtaccaaggaaagtaaagagtgccgcagagaagtttaatttgagttttcctcctagt
gagatcattagtccagagaaacagcaacctttccagaatcttttaaaagaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacagaatactgagagacaaaac
aggcgtattctacattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttatcagaagctgctggcaaattctcaatccttagctgaccttttggat
gaaaatatgccagatcttcctcaggacaaaccaacaccagaagagcatgggcctggaatt
gatatatttacaccgggtaaacctggagattatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgaaaacctcattgatttgaaagcttttgttccagccatc
ttgtttaaagataatgaaaaaagttgtcagaataaagattccaacaaggatgattctaaa
gaagcaaaagaacctaaggataataaggaggtaccgaatcctgatgacctggaactcgag
ttggagaacctagagattaatgatgatgctttggagttagagggtggagatgaagctgaa
gatcttacaaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcactgga
tctcatctcaagctcatagtagatgctttcctccagcagttgcccaactgtgtcaaccgt
gatctgatagacaaggtatgattgtctctatgtaactttactcaagcacatacaccttcg
ctgatcttgcacctttccagtggcacctgcctggccttcattcgttcctgtagtggctcc
cccgcgcccgctgctgccctccccacccaaaggattttccggtccaaaatgtcagtggtg
ctgaggctgggaaacctgaagtgggaacaaatgatgagaaagaaacaagccatgcacctc
gatgcgaggtacgtcacaatggtcgagaacgcctattactactgcaacccacccccagct
gaaaaaacagtgaaaaagaagcgtcctcctctccaggaatatgtccggaaacttctgtac
aaggatctctccaaggttaccaccgagaaggttttgagacagatgcgaaagttgccctgg
caggaccaagaagtaaaagactatgtcatttgctgcatgataaacatctggaacgtgnaa
tacaacagcattcattgtgtggccaacctcctagcagggctcgtgctctaccaggaggat
gttggaatccatgtcgtagatggagttttagaagacatccgattgggaatggaggttaac
caacctaaatttaatcagagacgtatcagcagtgccaaattcttaggagagctgtataat
taccgaatggtggaatcggctgtgatttttagaacgctttattcttttacttcgtttggt
gttaactctgacgggagcccaagttccctggaccctcccgagcaccttttcaggattaga
ctagtgtgcactgttttggatacctgcggccagtacttcgacagaggttccagtaaaaga
aaactcgattgcttccttgtgtattttcagcgttatgtttggtggaagaaaagtttggag
gtttggacgaaagatcatccatttcctgttgacatagattacacgatcagtgacagccta
gaactgctaagaccgaagatcaaactgtgtaattctctggaagaatccatcaggcaggta
cacgccttggagcgagagttcttaataaaactgggcctagtaaatgacaaagactcaaaa
gactctatgacagaaggagaaaatcttgaagaggatgaagaagaagaagaaggaggagct
gaaacagaagaacaatctggaaatgaaagtgaagtcaatgaaccagaagaagaggagggt
tctgttttttaa
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