Vicugna pacos (alpaca): 102526511
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Entry
102526511 CDS
T08098
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03013
Nucleocytoplasmic transport
vpc03015
mRNA surveillance pathway
vpc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102526511 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
102526511 (ACIN1)
03015 mRNA surveillance pathway
102526511 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102526511 (ACIN1)
03041 Spliceosome [BR:
vpc03041
]
102526511 (ACIN1)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102526511 (ACIN1)
Spliceosome [BR:
vpc03041
]
Complex C
Other components
EJC/TREX
102526511 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
DUF3103
Motif
Other DBs
NCBI-GeneID:
102526511
NCBI-ProteinID:
XP_015105871
UniProt:
A0A6J0B180
LinkDB
All DBs
Position
6
AA seq
1417 aa
AA seq
DB search
MWRRKYPSSSGGTRGVLSGNRGVDYGSGRDQLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSSVSEEKGESDDEKPRKGERRSSRVRQARAAKLS
EGSQAAEEEEDQETPSRILRVRADRNLKTEEEEEEEEEEEEEEEEEEDDGEGQKSRDAPV
LKQFKEEGGEEIPRVKAEEVVDERPQTIRSQEPEGLERGGRVTRSQEEARRSHLARQQEK
EMKTVSPLEEEEREIKSLKGLEEKSKSPSPPRLTEDLEKTPLVLQPEQTASEEETPPPLL
TKEASSPPPNTQLQSEEEIEHMEGPAPPVLIQLSPPNTDAEARELLLSQHTVQLVGGLSP
LSSPADIKAESPVEEVPEECVLPLVQKSTLAESSTQRGLETKSEKPAQPLPLKVEELALA
RGIVEEPLEQKEGRRASHTLLPSHRLKRSADSSSSRSSSSSSSSSRSRSRSPDSSGSQSH
SPPRSKQRDVSRAHTHANPRDRSKMGSRSTSESRSRSRSRSRSASSNSRKSLSPGVSRDS
STSYTETKDPSSGQEVATPPVPQLQVLEPKERTSTSSSIQVRRMSQPEPAEKHVTQRLQP
ERGSPKKCEAEEAEPPAATQPQTLETQTSHLPESERIHRTVEEKEEVTMDTSENRPENEV
PEPLMPIADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISVVSATKGVPAGNSDTEGGQP
GRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAIVDLHADDSRISEDETERN
GDDGTHDKGLKICRTVTQVVPAEGQENGQRDEEEEEKEPEAEAPVPPQVSVEVALPPPVE
HEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTL
GQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCAD
YAEQDELDYHRGLLVDRPSETKTEEQGVPRPLHPPPPPPAQPPQHPRAEQREQERAVREQ
WAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEE
PPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREK
EAERERTRQLEREKRREHSRERDRERERDRERDRGDRDRERERDRERGRERDRRDTKRHS
RSRSRSTPVRDRVGAASWGNTRESCRHLPPCPRGVQGHRGIGTISITLEPGVFHTICPVL
KYGCHLSPHTKWSSGHLAPTPVIYLLRPSPLLRLISH
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaagtacccgagcagttccggaggaacccggggagttctgagtggtaat
cgaggggttgactatggcagtgggcgggatcagctcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctccgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaagcactcaacaccccatgctgca
ttccagccaaactctcagattggcgaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaggagctgcttaggcagcgtctggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcccgagggagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcacccagaaaaagctcctctgtttctgaagagaaaggtgaatctgatgatgagaaa
ccaaggaaaggagaaagacgatcatccagggtcagacaggcaagggcagctaaactctct
gagggcagccaggctgctgaggaggaagaggatcaagaaacaccttccagaattctgagg
gtcagagcagatcgaaatttgaaaacagaggaagaagaagaggaggaggaggaagaggaa
gaagaggaggaagaggaggaagatgatggcgagggacaaaaatctagggatgcaccagtc
ctgaaacaatttaaggaagaaggaggggaagagatacccagagtaaaagcagaggaggtg
gtggatgagagaccccaaactataagatcccaggaaccggaggggttagagagaggaggg
agggttacaaggtcccaggaagaggctagaagaagtcatctggccagacagcaggagaaa
gagatgaaaacagtttctccccttgaggaagaagaaagagaaataaaatctttaaaaggc
ttggaggaaaaatcgaagtcaccttcccctcctagactgactgaagatctggagaagacc
cctcttgtgctacaaccagagcaaactgccagtgaggaggagactcccccacctttactt
accaaggaagcatcttctccaccacctaatacacaactccagagtgaagaagaaatagaa
cacatggaaggcccagcccctcctgtcctcattcagttatctcctcctaatacagatgct
gaggccagggagctgttactatctcagcatactgtgcagttggtgggaggcctgtctcct
ttgtcaagtcctgcagacatcaaagcagaatctccagtagaggaagtgccagaggagtgt
gtcctgcctctagttcagaaaagcacactagctgaatcctcaacccagaggggtcttgaa
actaaatcagaaaaacctgctcaaccactccctctaaaagtcgaggaattagcactggcc
agagggattgttgaagaacctttggaacagaaggaaggcagaagggcttctcatactctt
ctcccaagccacagattgaaacggtcagctgactcatcctctagccggtcctcctcatct
tcatcctccagttctagatcaaggtctcgctctcctgacagctcaggctctcagtctcac
tcacctccaaggtccaagcagagagatgtatctcgggcacatactcatgccaaccctcgt
gatagatccaagatgggctccagatcaacatctgagtccaggtcacgttcccgttctcgt
tcacgttcagcatccagcaacagcagaaaatctctgagccctggagtctccagggacagc
agcaccagctacactgaaaccaaagatccctcttctggtcaggaggttgcaactccacca
gtgccacaactgcaggtccttgagccaaaggagaggacttccacctcatcctctatccaa
gtgaggcgtatgagccaacctgagccagccgaaaagcacgtgacccagaggttacagcct
gagcgggggagcccaaagaagtgtgaagctgaagaggcagagccaccagctgccacacag
ccccaaaccttggagactcagacctctcacctaccagaatcagaaaggattcatcgcact
gttgaggagaaggaggaagtgaccatggacacaagtgaaaacagacctgaaaatgaggtt
ccagagcccctcatgcctattgcagatcaagtcagcaatgatgaccgcccagagggcagt
gccgaggatgaggagaagaaagagagctcgctgcccaaatcattcaagaggaagatctcc
gttgtctcagcaaccaagggggtgccagctggaaacagtgacacagaggggggccagcct
ggtcggaagcggcgttggggagccagcacagccaccacacagaagaaaccttccatcagt
atcaccaccgaatcactcaagagcctcatccccgacatcaaacccctggcggggcaggag
gctattgtggatcttcatgctgacgactcccgaatctctgaggatgagacagagcgtaat
ggtgacgatgggacccatgacaaggggctgaaaatatgccggactgtcactcaggtggtg
cctgccgagggccaggagaatgggcagagggacgaggaggaagaagagaaggagcctgaa
gcagaagcccctgtacctccgcaggtctcagtagaggtggccttgcccccacctgtggag
catgaagtaaagaaagtgactttaggagatacgttaactcgacgttccattagccagcag
aagtctggagtttccattacaattgatgacccagtccggactgctcaggtgccctcccca
ccccggggcaagatcagtaacatcgtccacatctccaacttggttcgtcccttcacttta
ggccaattgaaggaattgttggggcgtacgggaactctggtggaagaggctttctggatc
gacaagatcaaatctcactgctttgtaacgtattcaacagtagaggaagcagttgccacc
cgcacagctctacatggggtcaaatggccccagtccaatcccaaattcctttgtgctgac
tatgctgagcaagatgagctggattatcaccgaggcctcttggtggatcgtccctctgaa
actaagacagaggagcagggagtaccacggccgctgcaccccccgcccccgcccccagcc
cagccaccacagcaccccagggcagagcagcgggagcaggagcgggcggtgcgggaacag
tgggcagagcgggagcgggaaatggagcggcgggagcgaactcgatcagagcgtgaatgg
gatcgggacaaagttcgagaagggccccgttcccgttcacggtcccgtgaccgccgccgc
aaggaacgtgcaaagtctaaagaaaagaagagtgagaagaaagaaaaagctcaggaggaa
ccacctgccaagctgctggacgaccttttccgtaagaccaaggcagctccctgcatctat
tggctcccactaactgacagccagattgttcagaaggaggccgagcgggctgaacgggcc
aaggagcgggagaagcggcgaaaggagcaggaagaagaagagcagaaggaacgggagaag
gaggccgagcgggaacggaccagacagctggagcgggagaagcggcgagagcacagccgg
gagagggacagggagagagagagggacagggagcgggacaggggggatagagatcgggag
agggagagggaccgggaacgaggcagggagagggaccgcagagacaccaagcgccacagc
aggagccggagtcggagcacgccggtgcgggaccgggtgggcgccgctagctggggaaac
actagggagagctgcaggcatctgccaccctgccccaggggggttcaaggccacagaggg
ataggtacaatctccatcaccctggaaccaggggtctttcacaccatttgcccagtgctg
aagtatggctgccacctgtccccacataccaaatggagcagtggccatctcgcccccacc
cccgtaatctatctcttgagacctagccctctcctccgtctcatttcccattaa
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integrated database retrieval system
