Vicugna pacos (alpaca): 102526579
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Entry
102526579 CDS
T08098
Symbol
UBE4B
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04120
Ubiquitin mediated proteolysis
vpc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102526579 (UBE4B)
04120 Ubiquitin mediated proteolysis
102526579 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102526579 (UBE4B)
Enzymes [BR:
vpc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102526579 (UBE4B)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
U-box type E3
102526579 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF4568
Motif
Other DBs
NCBI-GeneID:
102526579
NCBI-ProteinID:
XP_015094100
LinkDB
All DBs
Position
13
AA seq
1365 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD
RNLMLNTGSNPGTSPMFCSLGSFGASSLSSLYETSPAPRTSFWSSGPLMSPSFASPSQAA
SQAAAPSVALSPHGAASRTAAGSQPSSPRYRPYTVTHPWGASSSPSPRSSGSSVLSSTPS
LPVPASSPQAVPASSSRHRPTSSGPPFLPASPSAVSRRPSSLRISPSLYDSPFSFLFLAL
SGDSSDEDEEDDDDGGGDDEGGGGGDEFSCVQFGSSLGASGGASTWDSYSDHFTIETCXX
XXXXXETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLT
QPRSMQQLSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLD
SDYFKYPLMALGELCETKFGKTHPVCNLVAALPLWLPKSLSPGSGRELQRLSYLGAFFSF
SVFAEDDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAA
LGYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCR
ITLPNDETRVNATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYI
RRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDE
SFLRRCLNFYGLLIQLLLRILDPAYPDVTLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQ
YSPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIE
NHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEF
NSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLA
QDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLK
VENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKS
TIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSI
ILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIHAWMREKQNSDH
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagatccgacggaggcgccttgcacgacttgctggtgga
cagacctcccagccaagcaccccgctcacctctccgcagagggagaaccctccggggcct
cctatagcagcatcagccccaggcccctcccagagtcttggtctcaacgtccacaacatg
accccagctacctccccaataggtgcatcaggagtagcccatcgaagccagagcagtgaa
ggagtcagttctctcagcagctcgccctccaatagccttgaaacacaatctcagtctctc
tcgcgctcccagagcatggatatcgatggtgtctcttgtgagaaaagcatgtcccaggtg
gatgtggattcaggaattgaaaacatggaggttgatgaaaatgatcgaagagaaaaaagg
agcctcagcgataaggagccttcatcaggttctgaagtgtctgaagaacaggccttacag
ctggtctgtaagatctttcgtgtctcctggaaggaccgggacagagatgtcatctttctt
tcttctctttctgcacaatttaagcagaacccaaaagaagtgttctccgattttaaggac
ttaattggccagattttaatggaagtcctaatgatgtccactcagactagagatgaaaac
ccatttgccagtctgacagccacatcccagccaattgcagcggcagctcggtcaccagac
agaaatctcatgctaaatactggctccaatccaggaacaagccccatgttctgcagtttg
ggttccttcggtgccagctctttgtctagcctgtatgaaactagtccagctcccaggacg
agtttctggagctcggggccactgatgagtccgtcttttgcctccccttcccaggccgcc
agccaggcggctgcgccttccgtggccctgagcccgcatggtgcggcctccaggacggcc
gcggggagccagccctcgtctccgcggtaccgcccctacactgtcacccacccctggggg
gcttcgtcttctcctagcccgcgatcctcgggcagctccgtcctgtctagcacaccaagc
ctccctgtccccgctagtagccctcaagcagtacctgccagctcttccagacacagaccc
accagctcggggccacctttcctgcccgcctcgcccagtgccgtgagcagacgtccctcc
tccctaaggatttctcctagtttgtacgacagtcctttctccttcctcttcctcgcactc
tctggggacagtagtgatgaagatgaagaagatgatgatgatggtggtggtgatgatgaa
ggtggtggtggtggtgatgagttttcttgtgtccagtttgggtccagtttgggagcctct
ggtggggcaagtacttgggattcctacagtgaccatttcaccattgagacgtgcnnnnnn
nnnnnnnnnnnnnnggagacagatatgctgaactacctcatcgagtgttttgaccgagtt
ggaatagaggaaaaaaaagcaccaaagatgtgcagccagccagccgtcagccagcttctg
agcaacatccgctcacagtgcatatcccatactgcattagtactacagggttccctcaca
caaccaaggtccatgcaacagctgtccttcctggtgccgtacatgctgtgtaggaatctc
ccctatggcttcattcaagaactggtgagaaccactcaccaggatgaagaagtgttcaag
cagatctttatccccattttacaaggcctggctctcgctgccaaagagtgctccctcgac
agtgactactttaaataccccctcatggctttaggtgagctctgtgaaaccaagtttgga
aagacacaccccgtgtgcaatttggttgctgctttgccgttgtggttgcccaaatcctta
agccctggctctgggcgggagctgcagaggctctcttatctgggggctttctttagcttc
tcagtctttgcagaagatgatgctaaagtggttgagaaatatttctcagggcctgccatt
accctggaaaacactcgcgtggttagccaatcactacagcattacttggagctaggaagg
caagagcttttcaagatcctgcatagtattttgttaaatggtgaaacccgggaggctgcc
cttggttatatggcagctgttgtcaacgccaacatgaagaaggcgcagatgcaaactgat
gataggttggtatctacagacggatttatgctgaatttcctttgggtgctgcagcagctc
agcaccaagatcaagttagagacggtggatcccacatatatattccacccaaggtgtcgg
atcactcttcccaacgacgagaccagagtgaacgcgacgatggaggatgtgaatgactgg
ctgactgaactttatggagatcagcctccgttttctgagccgaaattccctacggaatgc
ttctttcttaccctgcacgcccaccacctctctattctgccgagttgccgtcgctatatc
cgtagactccgggccatccgggagctgaatagaactgtggaagatttgaaaaataatgaa
agtcagtggaaagattccccactggcaactagacaccgggaaatgctgaagcgctgcaaa
actcagcttaagaaactggtacgatgcaaggcctgtgctgacgctggtttacttgacgag
agcttcctgagaagatgtctgaatttttatggccttctcattcagctgctgctccgcatc
ctggaccctgcctaccccgatgtaacactgcctttaaattcagatgtccccaaggtattt
gcagcattgcctgagttttatgtagaagatgttgctgaatttttattttttattgtacaa
tactctcctcaggtgctttatgagccctgtactcaggatattgtgatgttcctcgttgtg
atgttgtgcaaccagaactacatccgaaatccgtatctggtggccaaactggtagaagtc
atgtttatgaccaaccctgctgttcagccacgaacccagaagttttttgaaatgattgag
aaccatcctctctccaccaagttgttggtcccttccctgatgaagttttatacagatgtc
gagcacaccggagccaccagcgagttctatgacaagttcaccattcgctatcacattagc
accatttttaaaagcctttggcaaaacatagctcaccatggcacctttatggaggagttc
aattccggaaagcagtttgtccgctacataaacatgctgataaatgacacgacgtttttg
ctcgatgaaagtctggagtctctgaagcggatccatgaagtccaagaagagatgaagaac
aaggaacagtgggaccagctgcccagggatcagcagcaggcccgccagtctcagctcgct
caggacgagcgtgtttcgcgctcatatctcgccctggcgacggaaactgtggacatgttc
catatcctcacgaagcaggtccagaagccgttcctcagaccggaacttggaccccgactg
gctgcgatgctgaactttaatcttcagcaactctgtggtcctaagtgccgtgacctgaaa
gttgaaaaccctgagaaatacggctttgaaccaaagaagctgttggaccaactgacagac
atttacttgcagctggactgtgcccggttcgctaaagccattgctgacgaccagagatcc
tacagcaaagagctgtttgaagaagtaatttcaaagatgcggaaggcagggatcaaatcc
acaatagcgatagagaagtttaaactcctggccgagaaggtggaggagatagtggccaag
aatgcacgtgcagaaatcgactacagtgacgccccagatgagttcagagaccctctgatg
gacaccctgatgactgaccccgtgcggctgccctctggcaccatcatggaccgctccatc
atcctgcggcacttgctgaactcccccacggaccccttcaaccgacagacgctgaccgag
agcatgctggaaccagtgccagaactgaaagaacagattcacgcctggatgagagagaaa
cagaacagtgatcattaa
DBGET
integrated database retrieval system
