Vicugna pacos (alpaca): 102526612
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Entry
102526612 CDS
T08098
Symbol
SCN3A
Name
(RefSeq) sodium channel protein type 3 subunit alpha
KO
K04836
voltage-gated sodium channel type III alpha
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
102526612 (SCN3A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vpc04040
]
102526612 (SCN3A)
Ion channels [BR:
vpc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102526612 (SCN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
102526612
NCBI-ProteinID:
XP_031534280
UniProt:
A0A6J3AIG2
LinkDB
All DBs
Position
5
AA seq
2000 aa
AA seq
DB search
MAQALLVPPGPESFRLFTRESLAAIEKRAAEEKAKKPKKEQDNDDENKPKPNSDLEAGKN
LPFIYGDIPPGMVSEPLEDLDPYYISKKTFIVLNKGKAIFRFSATSALYMLTPLNPVRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCL
EDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPSDSAFETNTTSFFNATMN
TNGTFVNVTMSTFNWKDYIEDDSHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDYWENVYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQIKKQQEEAQAVAAASAASRDFSGIGGLGE
LLESSSEASKLSSKSAKEWRNRRKKRRQREHLEGNNKGQGNRFPKSESEDSVKRSSFLFS
MDGNRLTSDKKFYSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRVKDIGSENDFADDEHST
FEDSESRRDSLFVPHRHGERRNSNVSQASMSSRMVPGLPANGKMHSTVDCNGVVSLVGGP
SALTSPTGQLLPEGTTTETEVKKRRLSSYQISMEMLEDSSGRQRAVSIASILTNTMEELE
ESRQKCPPCWYRFANMFLIWDCCDTWLKVKHLVNLIVMDPFVDLAITICIVLNTLFMAME
HYPMTDQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISSDCQLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKN
KIRECFQKTFFRKPKVLEIHEGNKIDSCVSNNTGIEISKELNYLKDGNGTTSGVGTGSSV
EKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEESKEKLNATSSSE
GSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPFCQVSIEEGKGKIWWNLRKTCY
SIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLLKWV
AYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGDMFDVSDVNN
LSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDVKLQPVYEE
NLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLG
SKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSKYMTLVLSR
INLVFIVLFTGEFVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSPTLF
RVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYV
KKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPDTIHPGSSVKGD
CGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKF
DPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRV
LGESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQEEVSAAIIQRNFRCYLLKQRL
KKVLNEYNKEAIKGRIDLPIKDDMIIDKLNGNSTPEKTDGSSSTTSPPSYDSVTKPDKEK
FEKDKPEKGIKGKEVRENQK
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactactggtacccccaggacctgaaagcttccgcctttttactagagaa
tctcttgctgctattgaaaaacgtgctgcagaagagaaagccaagaagcccaagaaagaa
caagacaatgatgatgagaacaaaccgaagccaaacagtgacttggaagctggaaagaac
cttccatttatttatggagacatccctccagggatggtgtcagagccgttggaggacctg
gacccatactatatcagtaagaaaacttttatagtattgaataaagggaaggcaattttc
cgattcagtgccacctctgccttgtatatgttaactccgctaaaccctgttaggaaaatt
gctattaagattttggtacattctttattcagcatgcttatcatgtgcactatcttgacc
aactgtgtgtttatgactttgagtaaccctccagactggacaaagaatgtagagtacaca
ttcactggaatctatacctttgagtcactcataaaaatcttggctagagggttttgctta
gaagattttacatttcttcgtgatccatggaactggttggatttcagtgtcattgtgatg
gcatatgtgacagagtttgtggacctgggcaatgtctcagcattgagaacattcagagtt
ctccgagcactgaaaaccatttcagtcattccaggtttaaagaccatcgtgggtgccctg
atccagtctgtgaagaagctttctgacgtcatgattttgactgtgttctgtctgagcgtg
tttgctctaattggtctgcagctgttcatgggcaacctgcggaataaatgcttgcaatgg
cccccaagcgattctgcttttgaaaccaacaccacctccttctttaatgccacaatgaat
acaaatgggacatttgttaatgtaacaatgagcacgtttaactggaaggattacattgaa
gatgacagtcacttttatgttttggatggacaaaaagaccctttactctgtggaaatggc
tcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtcgaaaccccaac
tatggctatacaagctttgatacttttagctgggctttcttgtctctatttcgactcatg
actcaagactactgggagaacgtttaccagctgacgttacgtgctgctggaaaaacatat
atgatatttttcgtcttggttattttcttgggctctttttatctggtgaatttgattctg
gctgtggtggccatggcctatgaggaacagaatcaggccaccttagaagaggccgaacag
aaagaggctgaatttcagcaaatgcttgaacagattaaaaagcaacaggaagaagctcag
gcagttgcagcagcatcagctgcttcaagagatttcagtggaataggtgggttaggagag
ctgttggaaagttcttcagaagcatccaaattaagctccaagagtgctaaagaatggagg
aaccgaagaaagaaaagaagacagagggagcatctggaaggaaacaacaaaggacaggga
aacaggttccccaaatctgaatctgaggacagtgtcaaaagaagcagcttccttttctct
atggatggaaaccgactgactagtgacaagaaattctactcccctcatcagtctctgtta
agtatccgtggctccctgttttccccacgacgcaatagcaaaacaagcattttcagcttc
agaggtcgggtaaaggatattggttctgaaaacgactttgctgatgatgaacacagtaca
tttgaagacagcgagagcaggagagactcactgtttgtgccacacagacatggagagcga
cgcaacagtaacgttagtcaggccagtatgtcatccaggatggtgccagggcttccagca
aatgggaagatgcacagcactgtggattgcaatggtgtggtttccttggtgggtggacca
tcagctctaacctcacctactggacaacttctgccagagggcaccaccactgaaacagaa
gtcaaaaagagaagactaagttcttatcagatttcaatggagatgctagaggattcctct
ggaaggcaaagagccgtgagcatagccagcatcctgactaacacaatggaggaacttgaa
gaatctaggcagaaatgtccaccatgctggtacagatttgctaatatgttcttgatctgg
gactgctgtgacacatggttaaaagtaaagcatcttgtgaatttaattgttatggatcca
tttgttgacctggccatcaccatctgcattgtcttaaataccctattcatggccatggag
cactacccaatgactgatcaattcagtagtgtgttgactgtaggaaacctggtcttcact
gggatcttcacagcagaaatggtcctcaagatcattgccatggatccatattattatttc
caagagggatggaatatctttgatggaattattgtcagccttagtttgatggagcttggc
ctggcaaatgtggagggactgtctgtactgagatcgttcagactgcttcgagttttcaag
ttggcaaaatcctggcccaccctgaatatgctaattaagatcattggcaattctgtggga
gctctgggaaacctcaccttggtgttggccatcattgtcttcatttttgccgtggtcggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatctctagtgactgtcaa
cttccacgttggcacatgaatgacttcttccactccttcctcattgtgttccgagtgctg
tgtggagagtggatagagaccatgtgggactgcatggaagtcgctggccaaaccatgtgc
cttattgttttcatgttggtcatggtcattggaaaccttgtggttctgaacctctttctg
gccttattgttgagttcatttagctcggacaatcttgctgctactgatgatgataatgaa
atgaacaatctccagattgctgtaggaaggatgcaaaagggaattgattacgtgaaaaat
aagatacgagagtgtttccaaaaaacttttttcagaaagccgaaagttctagaaatccat
gaaggcaacaaaatagacagctgtgtgtccaataatactggaattgaaataagcaaagag
cttaattatcttaaagatggaaatggaaccaccagtggtgtgggtaccggaagcagtgtt
gaaaaatatgtaatcgatgaaaatgattatatgtcattcataaacaatccgagcctcact
gtaacagtgccaattgctgttggagagtctgactttgaaaacttaaatactgaagagttc
agcagtgagtcagaactagaagaaagcaaagagaaattaaatgcaaccagctcatctgaa
ggaagtacagtcgatgttgctccaccccgagaaggtgaacaagctgaaattgaacccgag
gaagaccttaaaccagaagcttgttttactgaaggatgtattaaaaagtttccattctgt
caagtaagtatagaagaaggcaaaggaaagatctggtggaatctccgtaaaacctgctac
agcattgttgaacacaactggtttgagactttcattgtcttcatgatccttctcagtagt
ggtgctttggcttttgaagatatatacattgaacagcgaaagactataaaaaccatgcta
gaatatgctgacaaggtcttcacttatatattcattctggaaatgcttctcaaatgggta
gcttatggatttcaaacatacttcactaatgcctggtgctggctagatttcttgatcgtc
gatgtttctttggttagcttagtagccaatgctcttggctactcagaacttggtgccatc
aaatccctacgaacattaagagctttaagacctctgagagctttatcccggtttgaaggc
atgagggtggttgtgaatgctcttgttggagcaattccctctatcatgaacgtgttgttg
gtctgtctcatcttctggctaatctttagcatcatgggtgtgaatttgtttgctggaaag
ttctaccactgcgtaaacacaacaacaggtgacatgtttgatgtcagtgacgttaacaat
ctgagtgattgtcaggctctcggcaagcaagctcggtggaaaaatgtgaaagtaaacttt
gataatgttggtgctggctatctcgcattgcttcaagtggccacatttaaaggctggatg
gatattatgtatgcagctgttgattcacgagatgttaaacttcagcctgtatatgaagaa
aatctgtatatgtatttatactttgtcatctttatcatctttgggtcattcttcactctg
aatctattcattggtgtcatcatagataacttcaaccaacagaaaaagaagtttggaggt
caagacatctttatgacagaggaacagaaaaaatattacaatgcaatgaagaaacttggg
tccaagaaacctcagaaacccatacctcggcctgcaaacaaattccaaggaatggtcttt
gattttgtaaccagacaagtttttgatatcagcatcatgatcctcatctgcctgaatatg
gtcaccatgatggtagaaactgatgaccaaagtaaatatatgactctagttttgtctcgg
atcaaccttgtgttcattgtcctgttcactggagaatttgtgctgaaacttatctcactc
agatactactacttcaccataggctggaacatctttgattttgtggtggtgattctctcc
attgtaggtatgtttctggctgagctgatagaaaaatattttgtgtcccctaccttgttc
cgagtgatccgtctcgccaggattggccgaatcctgcgtctgatcaaaggggcgaagggg
atccgcacgctgctctttgctttgatgatgtcccttcctgcgttgtttaacatcggcctc
ctgctcttcctggtcatgttcatctacgccatctttggcatgtccaactttgcctatgtt
aaaaaggaagctggaatcgatgacatgttcaactttgagaccttcggcaacagcatgatc
tgcctgttccagatcaccacctctgctggctgggatgggttactagcacctattctcaat
agtgcaccacccgactgtgacccagacacaattcaccctggaagctctgttaagggagac
tgtgggaacccctctgttgggattttcttttttgtcagttacatcatcatatcgtttctg
gttgtggtgaacatgtacatcgctgtcatcctggagaacttcagtgttgctactgaagaa
agtgcagagcccctgagtgaggatgactttgagatgttctacgaggtttgggagaagttt
gacccagatgccacccagttcatagagttctccaagctctctgattttgcggctgccctg
gatcctccgcttctcatagcaaaaccaaacaaagtccagctcattgccatggatctgccc
atggtcagtggggacaggattcactgccttgacatcttatttgcctttacaaagcgtgtt
ttgggtgaaagtggagagatggatgcccttcgaatacagatggaagataggttcatggca
tcgaacccctccaaagtctcttatgagcccattacaaccactttgaaacgcaaacaagaa
gaggtgtctgctgctatcattcagcgtaatttcagatgttatcttttaaagcaaaggtta
aaaaaggtattaaatgaatataataaagaggcaatcaaagggaggattgacttacctata
aaagatgacatgattattgacaaattaaatgggaactccaccccagaaaaaacagatgga
agttcctctaccacctctcctccttcttatgatagtgtaacaaaaccagacaaagaaaag
tttgagaaagacaaaccagaaaaaggaatcaaagggaaagaggtcagggaaaatcaaaag
taa
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