KEGG   Vicugna pacos (alpaca): 102526945
Entry
102526945         CDS       T08098                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102526945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vpc03019]
    102526945
Messenger RNA biogenesis [BR:vpc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102526945
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     102526945
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N ECR1_N_2 RRP40_S1 EXOSC1
Other DBs
NCBI-GeneID: 102526945
NCBI-ProteinID: XP_006219842
UniProt: A0A6I9IV53
LinkDB
Position
Unknown
AA seq 293 aa
MAMEMRLPVPRKPVSESLGRETKKHLVVPGDTITTDTGFMRGHGTYIGEEKLIASVAGPV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVPPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKEEDAGGFIANLEPVSLADREVISRLRNC
IVSLVTQRMLLYDTSILYCYEASLPHQIKDILKPEVMEEIVMETRQRLLEQEG
NT seq 882 nt   +upstreamnt  +downstreamnt
atggcgatggagatgaggcttcccgttccccgcaagcctgttagcgagagcttggggcgc
gaaactaagaagcacctggtggtgccgggggacacgatcaccacggacacaggcttcatg
cggggccatggaacctacataggggaagagaaactcattgcatcggtggctggccctgtg
gagagagtaaacaagttgatctgtgtgaaagctttgaaaaccagatacaatggtgaagtg
ggagacattgtcgtggggagaatcacggaggttcaacagaagaggtggaaggtggagacc
aactccaggctggattcagtcttgcttctctcgtccatgaaccttcccggaggagagctg
aggagaagatctgcagaagatgagctggcgatgagaggtttcttgcaggaaggggacctt
atcagtgctgaggtccaggcagtgttctctgatggagccgtctctctgcacacgaggagt
ctcaagtatggaaaactagggcagggtgttttggttcaggttcccccctccctggtgaaa
cggcagaagactcacttccatgacttgccatgtggcgcctcagtgattctgggcaacaac
ggcttcatctggatctacccaacacctgagcacaaagaggaggatgcagggggcttcatc
gcaaacctggagcctgtctcccttgctgatcgagaggtgatctcccggcttcggaactgc
atcgtctcgctggtcactcagaggatgctgctgtatgacaccagcatcctgtactgctat
gaagcctcacttccacatcagatcaaagacatcttaaagccagaagtaatggaggaaatt
gtgatggaaacacgccagaggcttttagaacaggagggataa

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