Vicugna pacos (alpaca): 102526968
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Entry
102526968 CDS
T08098
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04514
Cell adhesion molecule (CAM) interaction
vpc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102526968 (LRRC4B)
04517 IgSF CAM signaling
102526968 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vpc04515
]
102526968 (LRRC4B)
Cell adhesion molecules [BR:
vpc04515
]
Immunoglobulin superfamily
NGL family
102526968 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Ig_3
I-set
LRR_1
LRR_14
LRR_9
ig
V-set
LRRNT
Ig_2
LRR_EndoS
VEGFR1-3_N_Ig-like
DUF7617
Motif
Other DBs
NCBI-GeneID:
102526968
NCBI-ProteinID:
XP_031537451
LinkDB
All DBs
Position
11
AA seq
654 aa
AA seq
DB search
MARARGSLCPPLPPGRMSWPHGALLFLWLFSPPLGAGGGGVAMTSAAGGGSPPATSCPSA
CSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKN
LVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR
VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNR
LDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL
HRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFT
CYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGT
LNFTNVTVQDTGQYTCMVTNSAGXXXXXGTEKEPPGPTTDGVWGGRRPGEAAGPASSSTT
APAPRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKL
RKQHQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGGGVGGDSHLALPALERDH
LNHHHYVAAAFKAHYSSNPSGGGCGGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgcccgcggctccctgtgccccccactgccgcccggtaggatgtcctggccc
catggggccctgctcttcctctggctcttctccccacccctgggggccggcgggggcggc
gtggccatgacatctgccgctggagggggctccccgccggccacctcctgcccctcggcc
tgctcctgcagcaaccaggccagccgggtgatctgcacaaggagagagctggccgaggtc
ccagccagcatccccgtcaacacacggtacctgaacctgcaggagaacagcatccaggtg
atccggaccgacaccttcaagcacctgcggcacctggagattctgcagctgagcaagaac
ctggtgcgcaagatcgaggtgggcgccttcaatgggctgcccagcctcaacacgctcgag
ctgttcgacaaccggctgacgacggtgcccacgcaggcctttgagtacctctccaagctg
cgtgagctctggctgcgcaacaaccccatcgagagcatcccctcctacgccttcaaccgc
gtgccctcgctgcggcgcctcgacctgggcgagctcaagcggctggaatacatctcggag
gcggccttcgagggcctggtgaacctgcgctacctcaacctgggcatgtgcaacctcaag
gacatccccaacctgacggccctggtgcgcctggaggagctggagctgtcgggcaaccgg
ctggacctgatccgcccgggttccttccagggccttaccagcctgcgtaagctgtggctg
atgcacgcccaggtggccaccatcgagcgcaacgccttcgacgacctcaagtcgctggag
gagctcaacctgtcccacaacaacctgatgtcgctgccccacgacctcttcacgcccctg
cacaggctcgagcgtgtccacctcaaccacaacccctggcactgcaactgcgacgtgctc
tggctgagctggtggctcaaggagacggtgcccagcaacacgacgtgctgcgcgcgctgc
cacgcgcctgctggcctcaaggggcgctacatcggcgagctggaccagtcgcacttcact
tgctacgcgccggtcatcgtggagcctcccacggacctcaacgtcacggagggcatggcc
gccgagctcaagtgccgcacgggcacctccatgacctccgtcaactggctgacgcccaac
ggcaccctcatgacccacggctcctaccgcgtgcgcatctccgtcctgcacgacggcacg
ctcaacttcaccaacgtcaccgtgcaggacacgggccagtacacctgcatggtgacgaac
tcggccggnnnnnnnnnnnnnngggggacggagaaggagccgccggggcccacgacagat
ggcgtctggggcgggcgccggccgggggaggcggccggcccggcctcgtcgtccaccacg
gcgcccgccccgcgctcctcgcggcccacagagaaggcgttcacggtgcccatcacggac
gtgacggagaacgccctcaaggacctggacgacgtcatgaagaccaccaagatcatcatc
ggctgcttcgtggccatcacgttcatggccgctgtgatgctcgtggccttctacaagctg
cgcaagcagcaccagctccacaagcaccacgggcccacgcgcacggtggagattatcaac
gtggaggacgagctgcccgccgcctctgcggtgtctgtggccgccgccgctgccgtggcc
ggcgggggcggcgtgggtggggacagccacctggccctgcctgccctggagcgcgaccac
ctcaaccaccaccactacgtggcggccgccttcaaggcgcactacagcagcaaccccagc
ggcgggggctgcgggggcaagggcccgccgggcctcaactccatccacgaacctctgctc
ttcaagagcggctccaaggagaacgtgcaagagacgcagatctga
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