Vicugna pacos (alpaca): 102527120
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Entry
102527120 CDS
T08098
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpc03019
]
102527120 (TNRC6A)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102527120 (TNRC6A)
Messenger RNA biogenesis [BR:
vpc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102527120 (TNRC6A)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102527120 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102527120
NCBI-ProteinID:
XP_006201275
UniProt:
A0A6I9I423
LinkDB
All DBs
Position
18
AA seq
1968 aa
AA seq
DB search
MQLVAEPGLEARCPGSQDIPLPEEWNRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKK
DDKKKKEAAQKKATEQKIKVPEQIKPSVSQPQPANSNNGTSTATSTNNNAKRATASSQPQ
PQPPQPPPPQPPPQALPRHPRELPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQS
ESSALTNQQPQNNGEVQNSQNQSDINHNTSGSHYENSQQEPVSSTSDCSTNCKDAAVNDS
PEAEAWPSVPGSDPEVASECMDADSASSSESERNITIMASGSTGGEKDGLRNSTGLGSQN
KFVVGSSSNNVGHGSSPGPWGFSHGAIISTCQVSVDAPESKSESSNGRMNAWGTVSSSSN
GGLNPSTLNSASNHGAWPVLENNGLALKGPVGSGSSGVNVQCSPLGQMPNNQSINSKVGG
SSSHGTWGSLQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNN
ELPSSTGAWRVSTMNHPQIQAPSVMNGTSLSHLSNGESRSGGSYGTTWGAYGSNYSGDKC
ASPNGQANGDTVNATLMQPGINGPMGTNFQVNTNKGGGVWESGAANSQSASWGNGNGANS
GGSRRGWGAPAQNTGTNIPSVEWNKLPSNQHSSDSANGNGKKFTNGWKSTEEEDQGSAAS
QTNEQSSVWAKTGGTVESEGSTESTGRLEEKVTGENQSRDRRKIDQHTLLQSIVNRTDLD
PRVLSNSGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACIDKTSPNS
NDTSSVSGWGDPKPALRWGDSKGSNCQGGWEDDSAATGMVKSNQWGNCKEEKSAWNDSQK
SKQGWGDGQKSNQGWSVSASDNWGEASRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTS
SFTWGNNINPNNSSGWDESSKPNPSQGWGDPPKSSQSLGWGDSSKPVSSPDWNKQQDMVG
SWGIPPAAGKPPGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKY
NYKNVNMWNKNVPNGSSRSDQQAQVHQLLPSASAISNKEASGGSGWGEPWGETSAPATTV
DNGTSAWGKPTDSGPSWGEPIAAASSTSAWGSGSVGPQALSKSGPKSMQDGWCGDDMPLP
GNRPTGWEEEEDVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGN
KQEEAWINPFVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRT
VGKGPGSRPQISKESSMERSPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGS
IAGLGMQNLNSVRQNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQ
VPVSLLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPS
GNRQQQDQQGRPLSVQQQMMQQSRQLDPNLLVKQQTPPSQQQSLHQPAMKSFLENVMPHT
TPELQKGPSPINAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNS
SKHGAISSGFRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRP
GEPWKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWS
SIRASNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPP
PGLTGQKPPLSTWDNSPLRVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDG
STLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEE
EISRFFAQSQSLTPSPSWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLH
GTSLWGTPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgcaactagtggcagagccaggcctagaagccaggtgtcctggctcccaagacattccg
ctgcccgaggaatggaacagagaattggaagctaaagctaccaaagacgtagaaaggaat
cttagcagggatttagtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaa
gacgacaagaaaaagaaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtg
ccagaacagataaagcccagtgtaagccagcctcagcctgccaactctaataacggcact
tccacagcaaccagcactaataataatgccaagcgagccacagccagcagtcagccgcag
ccgcagccgccgcagccgccaccgccgcagccgccgccacaggccttgcctcggcatcct
cgggagcttccgccacgatttcgccaccaggagcataaacagcttctaaagaggggtcag
cattttcctgtcatagcagcaaacctgggatctgctgttaaagtgttaagcagccagtca
gaaagcagtgctttaacaaaccaacagccacaaaataacggagaggtgcagaacagccaa
aaccagtcagatataaaccacaatacttcaggatcccattatgagaattcgcagcaggaa
cctgtgtcttctacgagcgactgtagcacaaactgtaaggatgctgctgtaaacgactcc
cctgaagcagaagcatggccctcagtccctggcagtgatccagaggtggcttcagaatgc
atggatgctgattctgcctccagttctgaatcagagcgaaacatcactatcatggcttca
gggagcacaggtggtgaaaaagatggccttcggaacagcactggactcggatcccaaaac
aagtttgtggttggtagcagcagcaataacgtgggccatggaagtagtcctgggccgtgg
ggtttttcccatggagccataataagcacatgtcaggtctctgtggatgctcctgaaagc
aaatcagaaagtagcaacggtagaatgaatgcttggggcactgtaagttcttcatcaaat
ggagggttaaatccaagcactttgaattcagctagcaaccatggtgcctggccagtatta
gagaacaacggactcgccctgaaagggcccgtagggagtggtagttctggcgtcaatgtt
cagtgcagtcccttaggccagatgcctaacaatcagagtattaactctaaagtgggcggt
tcttcctcccacggcacctggggaagccttcaggaaacttgtgaatctgaagtaagtggt
acacagaaggtttcattcagtggtcaacctcagaatatcaccactgaaatgactggacca
aataacactactaactttatgacctctagtttaccaaactccggttcagtgcagaataac
gagctgcctagtagtacaggggcctggcgtgtgagcacaatgaaccatcctcagatacag
gctccgtcggttatgaacggcacttccctttctcaccttagcaacggagagtcaagaagt
gggggctcttatggtactacgtggggtgcctatggttctaattactctggagacaaatgt
gcaagcccgaatggccaagctaatggtgacactgtgaatgcaactctaatgcagcctggc
ataaatgggcctatgggcactaactttcaagttaacacaaataaaggaggaggtgtgtgg
gagtctggggcagcaaattcccagagtgcatcatggggaaatggaaatggtgcaaattct
ggaggaagtcgaagaggatggggagctcctgcacaaaacactggcactaacatacccagc
gtggaatggaacaaactgcctagcaatcagcattccagtgacagtgcaaatggcaatggt
aagaagtttacaaacggatggaaatctactgaggaagaggatcagggttctgccgcatct
cagacaaatgagcaaagcagcgtgtgggccaaaacaggaggtacagtggagagtgaaggt
agtacagaaagcactggacgccttgaggaaaaagtaactggggaaaatcagagtagagat
agaagaaaaattgatcagcacacattactccaaagcattgtaaacagaactgacttggat
ccacgtgtcctgtccaactctggttggggacagactcctattaagcagaatactgcctgg
gatactgaaacatcacctagaggggagagaaagactgacaatgggacagaggcctgggga
agctctgcaacacagacttttaactcaggggcgtgtatagacaagactagccctaacagt
aacgatacctcatctgtatcggggtggggagatcccaaacctgctctgaggtggggagat
tccaaaggctcaaactgccaggggggatgggaggatgactctgctgctacaggaatggtc
aagagcaatcagtgggggaattgcaaagaagagaagtctgcatggaatgattcgcaaaag
agcaaacagggatggggtgatggacaaaaatcaaaccaagggtggtccgtttccgccagt
gataactggggagaagcttcaaggagtaaccattggggtgaggctaataagaagtctagc
tcaggaggtagtgacagtgacaggtccgtttctggttggaacgaacttggtaaaacgagt
tcctttacttggggaaataacataaatccaaataattcatcaggatgggatgaatcttct
aaaccgaacccttcccagggatggggagaccctccaaagtctagtcagtctctaggttgg
ggagattcgtcgaagccagtcagttctccagactggaacaagcaacaagacatggtcgga
tcttggggaatcccgccagctgcaggcaaacctcctggtacaggctggctgggaggacct
ataccagccccagcaaaagaagaagagcccacaggctgggaggaaccatccccagaatcc
atacgtcgcaaaatggagattgatgatggaacttcagcttggggagatccaagcaaatac
aactacaaaaatgtgaacatgtggaacaaaaatgtcccaaatggcagcagccgttcagac
cagcaagcacaggtacatcagttgctaccatctgcaagtgccatctcaaacaaagaggca
agcggtggctccggctggggtgagccctggggggagacttctgctccagccacaactgtg
gataatggcacttcggcatggggtaagcccacagacagtggtcccagctggggggaaccc
attgctgcagcgtccagcacatccgcgtggggctccggctctgttggtccgcaagcgtta
agcaaatctgggccaaaatctatgcaagatggttggtgtggtgatgatatgccattgcct
ggaaatcgccccactggctgggaagaggaagaggatgtagaaattggaatgtggaatagt
aattcatctcaagagcttaactcatctttaaattggccaccatatacaaagaaaatgtca
tcgaagggtctgagtggcaaaaaaaggagaagggaaaggggaatgatgaaaggtggaaac
aaacaagaagaagcatggataaatccatttgttaaacagttttcaaatatcagtttttcg
agagattcaccagaagaaaatgtacagagcaataagatggacctttctggaggaatgtta
caagacaaacgaatggagatagataaacatagcctgaatattggtgattacaatcgaacg
gtcgggaaaggccctggttctcggcctcagatttccaaagagtcttccatggagcgcagt
ccttactttgataaggatggcattgtagcagatgaatcccaaaacatgcagtttatgtcc
agtcaaagcatgaagcttcccccttcaaatagtgcactacctaaccaggcccttggctcc
atagcagggctgggtatgcaaaacttgaattctgttagacagaatggcaatcccagtatg
tttggtgttggaaacacagcagcacaaccccggggcatgcagcagcctccagcacaacct
ctcagttcatctcagcctaatctccgtgctcaagtgcctcctccattactctcccctcag
gttccagtttcattgctgaagtatgcaccaaacaacggtggcctgaatccgctctttggc
cctcaacaggtagccatgctgaaccagctatcccaactaaaccagctttctcagatctcc
cagttacagcgattgttagcgcagcagcaaagggcgcagagtcagagaagcgtgccttct
gggaaccggcagcagcaagaccagcagggtcgacctcttagtgtgcagcagcagatgatg
caacagtctcgtcaacttgatccaaacctgttggtgaagcaacagactccaccatctcag
cagcagtcactccatcagccagccatgaagtccttcctggaaaacgtcatgccccacact
acacctgagctgcagaaagggccgtcaccaataaatgctttcagcaacttccctataggc
ttgaactcaaacttgaatgtaaatatggatatgaatagtattaaagagccacagtcaaga
ctaaggaagtggactacagtggacagcatttctgtgaacacatctttggatcaaaactcc
agcaaacatggtgctatttcaagtggtttcaggctggaagagtctccatttgttccctac
gactttatgaacagcagtacttcaccagccagtcctccaggttcaataggagatggctgg
ccacgtgccaaatcgcctaatggctctagcagtgttaactggccaccagaatttcgccct
ggtgaaccatggaaaggttatccaaacattgaccctgaaactgacccttacgtcactcct
ggcagtgtcataaacaatctttcaattaatactgtgcgggaagttgaccacctcagggac
aggaacagtgggtcatcctcatccttgaacaccacgctgccttcaactagtgcctggtca
tccattcgtgcctccaactacaacgttcccctcagcagtacagcacaaagcacttcagcc
agaaatagtgattccaaattgacatggtctcctggttcagttacaaacacctctctggct
catgagctgtggaaggtccctttgccacctaaaaacatcactgctccgtcccgcccacct
ccggggctgactggtcagaagccacccttgtctacgtgggataattctcccctccgtgta
ggtggaggatggggaaattctgacgccaggtacaccccaggttccagctggggtgagagc
agctcagggagaataacaaattggcttgttctaaaaaaccttacacctcagatcgatggc
tcaactctgcgtaccctgtgcatgcagcatggcccactgataacattccacctgaacctc
ccacatggaaatgctttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaag
tctctgcacatgtgtgtactggggaacactactattcttgctgagtttgccagtgaagag
gagatcagtcgtttctttgcacaaagtcagtctctgaccccttctcccagctggcagtct
ctcgggtccagccagagccggctgggctccctcgactgttcccactcgttctccagccgg
accgatctcaatcactggaatggtgctgggctgtcgggaactaactgtggagaccttcat
ggcacttccctctgggggaccccacattattccacaagcctgtgggggcctccaagcagc
agcgacccccggggaattagcagcccatcccccattaacgcttttctttctgttgaccac
ctgggtgggggtggagagtccatgtaa
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integrated database retrieval system
