Vicugna pacos (alpaca): 102527143
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Entry
102527143 CDS
T08098
Symbol
DHX29
Name
(RefSeq) ATP-dependent RNA helicase DHX29 isoform X2
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
vpc03012
]
102527143 (DHX29)
Enzymes [BR:
vpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102527143 (DHX29)
Translation factors [BR:
vpc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102527143 (DHX29)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
Helicase_C
DEAD
DSRM_DHX29
HA2_C
AAA_22
HA2_N
nSTAND3
AAA_19
ATPase
FtsK_SpoIIIE
AAA_16
Motif
Other DBs
NCBI-GeneID:
102527143
NCBI-ProteinID:
XP_006206062
UniProt:
A0A6I9IB93
LinkDB
All DBs
Position
3
AA seq
1366 aa
AA seq
DB search
MGKNKKHKAPGAAAVRAAVSASRAKSAEAGAAGEAQNKKPVARPSPAAAASTREPRVKQG
PKIYSFNSANDSGGPANLDKSILKVVINNKLEQKIIGVINEHKKQNNDKGVISGRLTAKK
LQDLYMALQAFSFKTKDIEDAMTNTLLHGGDLHSALDWLCLNLSDDALPEGFSQEFEEQQ
PKSRPKFQSPQIQATASLPLQPKAKKQEEDPKIKPKKEEKNLEVNMKEWILRYAEQQNEE
EKSENSKSLEEERFDPNERYLHLAAKLLDAKEQAATCKLEKNKQGQKEAQEKIRKFQREM
ETLEDHPVFNPAIKISHQQNERKKPPVAAEGESALNFNLFEKSTAAPEEEKGKKKEPHDV
RNFDYTTRSWTGKSPKQFLIDWVRKNLPKSPNPSFEKVPVGRYWKCRVRVIKSEDDVLVV
CPTILTEDGMQAQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDTEKKKEELNKMET
NKPRDLFIAKLLNKLKQQQQQQQQHSENKRENSEDPEESWENLVSDEDFSALSLESEKAE
DLEPLRNLFRRLQSTPKYQRLLKERQQLPVFKHRNSVVETLKRHRVVVVAGETGSGKSTQ
VPHFLLEDLLLNECGTSKCNIVCTQPRRISAVSLATRVCDELGCENGPGGKNSLCGYQIR
MESRAGESTRLLYCTTGVLLRKLQEDSLLTNVSHVIVDEVHERSVQSDFLLIILKEILQK
RSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYC
QKFLEEEEEITINVTSKAGGTNKYQEYIPVQTGTSADLNPFYQKYSARTQHAILYMNPHK
INLDLILELLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSDRYKVIALH
SILSTQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSS
LVEIFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMK
CNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGK
MLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYSAYLG
WKKAREEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTTSNGSEGNRA
LQTLSFQETALLKAVLTAGLYDNVGKILYTKSVDVTEKLACVVETAQGKAQVHPSSVNRD
LQTYGWLLYQEKIRYARVYLRETTLITPFPVLLFGGEIEVQHRERLLSVDGWIYFQAPVK
IAVIFKQLRVLIDSVLRKKLENPKMSLENDKILQIITELIKTENNN
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaacaagaaacataaggcgccgggggctgcggctgtccgggccgccgtctct
gcttccagagccaaatccgccgaggcaggagctgccggggaggcccaaaacaagaagcct
gtggccaggccgtcccccgctgccgctgccagcaccagggagccccgagtcaagcaaggt
ccgaaaatttatagttttaattctgcaaatgattctggtggtcctgcaaatctggataaa
tctattttgaaagtggtaattaataacaaactagagcaaaaaattattggagtgatcaat
gagcataaaaagcaaaataatgacaagggagtgatttctggaagacttactgccaaaaaa
ttacaggatttatatatggctttacaagcattttcatttaagactaaggacattgaagat
gccatgacaaacacactcttacatggaggtgatcttcattctgccttggattggctctgt
ttaaacctttcagatgatgcacttcctgagggattcagtcaggaatttgaagagcaacaa
cctaaaagcaggccaaaattccagtctcctcaaatacaagccactgcttcacttccactg
caacctaaagccaaaaaacaagaggaagatcctaagattaagccaaaaaaggaagaaaaa
aatttggaagtaaatatgaaagaatggattttgaggtacgctgaacaacaaaatgaagag
gaaaaaagtgagaactctaaaagtttagaagaggaaagatttgaccctaatgaaaggtac
ttgcaccttgcagcaaaacttctggatgcaaaggagcaagcagctacttgtaaactagaa
aaaaacaagcaaggccaaaaagaggctcaagaaaaaataaggaaatttcaaagagaaatg
gaaactttagaagaccatccagtatttaatccagccataaagatttcacatcaacagaat
gaaaggaagaagcctccagtagccgcagaaggggaaagtgctttgaactttaatttattt
gaaaaatctacagctgctcctgaagaagagaaagggaaaaagaaagaacctcatgatgta
agaaattttgactatactactcgaagctggactggaaaatctcccaaacaatttctgatt
gattgggtcaggaagaatcttcccaagagtccaaatccttcctttgaaaaagttccagta
ggtagatactggaaatgtagggtaagggtaatcaagtctgaagatgacgtactggtggtc
tgccctacaatcttaacagaggatggcatgcaagctcagcacctgggagctactttggct
ctttatcgtttagtgaaagggcagtcagttcatcagttgcttcctcccacttaccgagat
gtttggctggagtggagtgatacagaaaagaaaaaggaagaattaaataaaatggaaacc
aataaaccacgtgatctttttattgccaaacttctgaataaactgaaacagcagcagcag
cagcaacaacagcattctgaaaataagagagaaaactcagaagatcctgaggaatcttgg
gaaaatttagtttctgatgaggatttctctgcattgtccttggaatcagaaaaggcagaa
gacttggaacctcttaggaacctctttagaaggttgcaaagcacacctaagtaccagaga
cttctaaaggaaaggcaacagttacctgtgttcaaacacaggaattcagttgttgaaact
cttaaaaggcacagggttgtggttgtggcaggtgaaacagggagtggtaaaagtactcaa
gtgccacattttctattggaagatttgcttctaaatgagtgtggaacaagtaaatgtaac
attgtctgtacccagccccgcagaatctcagcggtgagtttagccacaagagtgtgtgat
gaattgggctgtgaaaatggacctggaggaaagaattctttgtgtggatatcagatccgg
atggagtctcgagctggtgaatctaccaggttactctattgtacaacaggggttttgcta
aggaaacttcaagaagatagtctcttaactaatgtgtctcatgttattgtagatgaggtt
catgaaagaagtgtccagtcagacttcctattaattatcttgaaagaaattttacagaaa
cgctctgacctacacttgattctaatgagtgccactgtagacagtgagaagttttctacc
tatttcacacactgccctattctgagaatttcaggaagaagttaccctgttgaggttttt
catcttgaagatataatagaagaaacaggcttcgtactggagaaagattcagaatattgt
cagaaatttctggaagaggaagaagaaataaccattaatgttacaagcaaagcaggggga
acaaacaagtatcaggaatacatcccagttcagactggaacaagtgctgatttaaatcca
ttttaccagaagtacagtgcccgcactcagcatgctattctctacatgaatcctcataaa
atcaacctggatctcattttggaacttctgacatacttagacagaagtccccagttcaaa
aatgttgaaggagcagtactgatctttctaccaggccttgctcatattcagcagttgtat
gatctcttatccactgacagaagatttttttcagatcgatataaagtgatagctctgcat
tctattctttcaactcaagatcaagctgcagcattcacacttcctcctcaaggagtcagg
aagattgtcttagcaacaaatattgcagagacgggtatcactattccagatgttgtattt
gtaattgatactggaagaacaaaagaaaataagtaccatgaaagcagtcagatgagttct
ttggtggagatatttgtcagcaaagcaagtgctctacagcgccaggggagagctgggcgg
gtcagagatggcttctgtttccgaatgtacacaagagaaagatttgaagggtttatggac
tattctgtccctgaaatcttacgtgtgcctttggaggaattatgtcttcatattatgaaa
tgcaatcttggttctcctgaagatttcctctccaaagctttagatcctcctcaacttcaa
gtaatcagcaatgcaatgaatttactccgaaaaattggagcttgtgaactaaatgagcct
aaactgactccactgggccaacacctagcagctttgcccgtgaatgtcaagattggcaag
atgcttatttttggtgccatatttggctgccttgatccagtggcaacactagctgcagtt
atgacagagaagtctccttttaccacaccaattggtcgaaaagatgaagcagatcttgca
aaatcggctttggctatggcagattcagaccatctgacgatctacagtgcatatctggga
tggaagaaagcacgggaagaaggaggctatcgttctgaaatagcatattgccggaggaat
tttcttaatagaacatcactgctaaccctagaggatgtaaagcaggagttaataaagttg
gttaaggcagcaggattttcatcatccacaacttctaatggctcagaaggaaacagagcc
ttacagaccctttccttccaagaaactgctcttcttaaagctgtactgaccgccggactg
tatgacaatgtggggaagatactctatacaaaatcagttgatgttacagaaaaattggct
tgcgttgtggagacagcccaaggcaaagcacaagtacatccatcctcagtaaatcgagat
ttgcaaacttatggatggcttttataccaggagaagataaggtatgcccgagtttatctg
agggaaactaccctaataaccccttttccagttttactttttggtggtgaaatagaagtt
cagcaccgggaacgtcttctctctgttgatggctggatctattttcaggcacctgtaaag
atagctgtcattttcaaacagctaagagttctcattgattctgttttaagaaaaaagctt
gaaaatcctaagatgtcccttgaaaatgataagattctacagatcattacagaattgata
aaaacagagaataataattga
DBGET
integrated database retrieval system
