Vicugna pacos (alpaca): 102527182
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Entry
102527182 CDS
T08098
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04120
Ubiquitin mediated proteolysis
vpc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102527182 (SYVN1)
04120 Ubiquitin mediated proteolysis
102527182 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vpc04121
]
102527182 (SYVN1)
Enzymes [BR:
vpc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102527182 (SYVN1)
Ubiquitin system [BR:
vpc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102527182 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
102527182
NCBI-ProteinID:
XP_006216756
UniProt:
A0A6J0B0B8
LinkDB
All DBs
Position
25
AA seq
611 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPQAPQPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAGAPPSTSTAALSRPSGA
ATTTAASAASAPAPGSASTPEASPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTP
DELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSANPTEET
APTAATAASSTSIPSSEATTPSPGASPPAPEPEKPPAPESVGTEELPEDGEPDAAELRRR
RLQKLESPVAH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgccgtgatgatggcggccagcctggcgctgaccggggctgtggtggct
catgcctactacctcaagcaccagttctaccccactgtggtgtacttgacgaagtctagc
cccagcatggcagtcctgtacatccaggccttcgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgttctttgggcagctgagggcagcagagatggagcatcttctggaacgt
tcctggtatgctgtcactgagacttgtctggccttcacggtctttcgggacgacttcagc
ccccgctttgttgcgctcttcactctcctcctcttcctcaagtgttttcactggctggct
gaggatcgtgtggactttatggaacgcagccccaatatctcttggctctttcactgccgc
attgtctcccttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgactatggtgctcaccattttcatcaagtacgtgctgcactccgtggacctccag
agtgagaatccttgggacaataaggccgtgtacatgctctatacggagctctttacaggc
ttcatcaaggttctgctgtacatggctttcatgaccatcatgatcaaggtgcacactttc
cctctctttgccatccggcctatgtacctggccatgaggcagttcaagaaagctgtgaca
gacgccattatgtctcgccgagccatccgcaacatgaacacactgtatccagatgccacc
ccagaggaactccaggcaatggacaacgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccataccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacctgccgtatggacgtcctccgggcatcgctgccgacc
cagtcaccaccgccccctgaacctgcagatcaggggccaccacaggctccccagccccca
ccactcctgccccagccccccaacttcccccagggcctcctgcctccctttcctccaggc
atgttcccgctgtggccccccatgggcccctttcctcctgtcccacctcccccgagctca
ggagaggcaggggcccctccgtccaccagcacagcagccctttctcggcccagtggagca
gccacaaccacagctgcttctgctgcctctgccccggcacctggctctgcctccacccct
gaagccagccccgccccaggcttccccttccctcctccctggatgggcatgcctctgcct
ccaccctttgccttccccccaatgcctgtgcctcctgccggctttgctgggctgaccccg
gacgagctgcgggctctggaaggccatgagcggcaacacctggaggctcgcctacagagc
ctgcgcaacatccacacgctgctggatgccgctatgctgcagatcaaccagtacctcacc
gtgcttgcctccctggggccccccaggcctgccacctcagccaaccccactgaggagact
gcccctacagctgccactgctgcctcgtccaccagcatccccagctctgaggccaccacc
ccgtccccaggagcctccccaccagcccctgaacctgaaaagcctccagctcctgagtca
gtgggcactgaggagctgcctgaggacggggagcctgatgcagcagagctccgtcgccgt
cgcctacaaaagctggagtcccctgttgcccactga
DBGET
integrated database retrieval system
