Vicugna pacos (alpaca): 102527294
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Entry
102527294 CDS
T08098
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X4
KO
K10779
transcriptional regulator ATRX
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102527294 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpc03000
]
102527294 (ATRX)
03036 Chromosome and associated proteins [BR:
vpc03036
]
102527294 (ATRX)
Transcription factors [BR:
vpc03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
102527294 (ATRX)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102527294 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102527294
NCBI-ProteinID:
XP_006218967
UniProt:
A0A6I9ITZ9
LinkDB
All DBs
Position
Unknown
AA seq
2489 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETSSPPRLVMNQSTDKISGSGNNSDMMENS
KEEGASSSEKSKSSGSSRSKRKPSIVTKYVESDDEKPLDETVNEDASNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVD
NEKSNKVYDHTPKFSPKKNSSNCNGEEKKLDDSCSGSVTYSYSALIVPKEMIKKAKKLIE
TTANMNSSYVKFLKQATDNSETSSSTKLRQLKAFKSVLADIKKAHLALEEDLNSEIRALD
AVNKEKNTKEHKVIDAKSETKVRKGEKLCALERKDISKSEAKLSRKQVDSEHMDQSVPVE
EQRANKSTSGERKKSDKKEEPQYEPTNTSEDLDMDIVSVPSSVPEDIFENLETAMEVQSS
ADYQGDGNSGTEQELEGSSIKLNIASKDSRGGIKSKTTAKVTKELYVKLTPVSLSNSPIK
GADCQEVPQDKDGYKSSGLNPKPENCGLGQEKNDNGHLVESEVPLLSEESDLRRSPRVKT
TPLRRQTETNPATSNSDEENNETVKEKQKLPVPMRKKDKRNSSDNAVDNPKPNKLPKSKQ
SEIMDQNSDSDEVLAILKEVSRMSHSSSSDTDINETHTNHEKTLYDINTQTGKDDKGKRK
RKSSTSGSDFDIKKGKSAKRSTISKKKRQNQSESSNYDSELEKEIKSMSKIGAARTTKRR
VPNKEDYDSSEDEKHSKKGIDNQEQKSLRTTQEGSSDDADRKQERENFSSAEGIVDKDKT
IMELRDRLSKKQQPSISSDGADKLSCGKEESFNSPEDKKVAETKEKSKHLKTKTCKKVQG
GLPDVAEKFPKKEQSDESSEDDKKQSKKGTEEKEKKTVDLKRKVIKMEQQYESSSDGTDK
LPEGEEICHFPKGIKPNKNDTTDGEKKSKKIKDKTSKKKDELSNNAEKLPGKRDSCDSSE
DKKGNNGTSSRQKKRCNLPEKSSRKRQDCSSSDAEKYSMKEDGCDSSDKRLKRTELRERR
NLNFKRNTKEVQSGSSSSDVEESSEDNKKLKKQRASAKKKAGSIKEKMRNSLRTSTKRKQ
ADITSSSSSDLGDDDQNSVGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVT
VDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDESEEGKKRAGKHNEENPGDEEAK
NQVNSESDSDSEESKKPRYRHRLLRHRLTVSDGESGEEKKMKPKEHKEAKGRNRRKVSSE
DSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSE
NKSNSEEDDKEEDEDEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERR
KRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQ
VDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALV
VCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYE
MYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRI
ILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRA
HILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSSEGG
RGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSS
DDYTKKKKTKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNNPSVSLKL
EESKATSSSNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQS
LISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFN
DETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVY
RFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKK
KKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKK
GLTMRFNIPTGTNLPPVSFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVT
AVRIQPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLIS
CVQRILMNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRGMYQSV
AGGMQPPPLQRAPPPMRSKNPGPSQGKSM
NT seq
7470 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagcccatgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcctggcacattcatcagaagaatctgaagaaacgagttctcctccaagacttgtgatg
aaccaaagcacagataaaattagtggttctggaaataactctgatatgatggaaaacagc
aaggaagagggagctagctcttcagagaagtccaaatcatcaggatcatcacgatcaaag
aggaaaccttcaattgtaactaagtatgtagaatctgatgatgaaaaacctttggatgaa
actgtaaatgaagatgcttctaatgaaaattcagaaaatgatattactatgcaaagcttg
ccaaaaggtacagtgattgtacagccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatgggattgtgagctgcacagcttgtggacaacaagtcaatcatttt
caaaaagattccatttatagacatccttcactgcaagtacttatttgtaagaattgcttt
aaatattacatgagtgatgatattagccgtgactcagatggaatggatgaacaatgtaga
tggtgtgcagaaggtggaaacttgatttgttgtgatttttgccataatgccttctgcaag
aaatgcattctacgcaaccttggtcgaaaggagctgtctacaataatggatgaaaacaac
caatggtattgctacatttgtcacccggagcctttgttggacttggtcacggcatgtaac
agtgtatttgaaaatttagaacagttgttgcaacaaaataagaagaagataaaagttgac
aatgaaaagagtaataaagtatatgaccatacacccaaattttctccaaagaaaaatagt
tcaaactgtaatggagaagaaaagaagttagatgattcatgttctggttctgtaacctac
tcttattcagcactaattgtgccaaaggagatgattaagaaggcaaaaaaactgattgag
accacagccaacatgaactccagttatgttaagtttctgaagcaagcaacagataattca
gaaaccagttcgtctacaaagttacgtcagcttaaggcttttaaatctgtgttggctgat
atcaagaaagctcatcttgcattagaagaagatttgaattcagagattcgagctttggat
gctgtaaacaaagagaaaaataccaaagagcataaagtcatagatgctaagtctgaaaca
aaagtacgaaaaggagaaaaactctgtgctttggaaaggaaggatatttcaaaatcagaa
gctaaactgtcaagaaagcaggtagatagtgagcatatggatcagagtgttccagtagag
gaacaaagagcaaataaaagtaccagtggtgaacgtaagaaatctgataaaaaagaagaa
cctcagtatgaacctactaacacttctgaagacttagatatggacattgtatctgttcct
tcctcagttccagaagacatttttgagaatcttgagactgctatggaagttcaaagttca
gctgattatcagggagatggcaacagtggaactgagcaagaactggagggttcttctata
aaattaaatattgcttcaaaagacagcagaggaggtattaaatcaaaaacaacagctaaa
gtaacaaaagaattatatgttaaactcacccctgtttccctttctaattccccaattaaa
ggtgctgattgtcaggaagttccacaagataaagatggctataaaagttccggtctgaac
cccaagccagagaactgtggacttggacaggaaaagaatgataatgggcatttggttgaa
agtgaagttccactactttcagaagaatctgatcttcgaagatctccacgtgtaaagact
acacccttgaggcgacagacagaaaccaaccctgcaacatctaattcagatgaagaaaat
aatgaaacagttaaggagaaacaaaaactaccagttccaatgagaaaaaaggataagcgg
aattcttctgacaatgctgtagataatcctaaacctaataaattgcctaaatctaagcag
tcagagatcatggatcaaaattcagattctgatgaagtgctagcaatcctcaaagaggta
tccaggatgagtcacagttcttcttcagatactgatattaatgaaactcatacaaatcat
gagaagactttgtatgatataaacactcaaacaggaaaagatgataaaggaaaaaggaaa
cgaaaaagttctacttctggctcagattttgatattaaaaaaggcaaatcagctaaaagg
tctacaatttctaaaaagaaacgacaaaatcagtctgaatcttctaattatgactcagag
ttagaaaaagagataaagagcatgagtaaaattggggctgccagaacaaccaaaagaaga
gttccaaataaagaagattatgattcgtccgaagatgaaaaacacagcaagaaaggaata
gataatcaagagcagaaaagtttgaggactacacaagaagggtcatctgatgatgctgac
aggaaacaagagagagagaatttctcttcagcagaaggcatagttgataaagacaagacc
atcatggaattgagagatcgactctctaagaagcagcagccaagtatttcctctgatggt
gctgataaactttcttgtgggaaagaggagagttttaattctccagaagacaaaaaggtt
gctgaaactaaagaaaagagtaagcatctgaaaacgaaaacgtgtaagaaagtacagggt
ggcttacctgatgttgctgagaagttcccaaagaaagaacagagtgatgaatcctctgaa
gatgataaaaagcagagcaaaaagggaactgaggaaaaagaaaagaaaactgtagacttg
aagagaaaagtaattaagatggaacaacaatatgaatcatcatctgatggtactgacaaa
ttacctgaaggagaagaaatttgtcattttcctaaaggcataaaaccaaataagaatgac
acaactgatggggaaaagaaaagtaaaaaaataaaagataaaacttctaaaaagaaggat
gaattatccaataatgctgagaagttaccagggaaaagagatagttgtgattcttcagaa
gataagaagggtaacaatggaacatccagtagacagaagaaaaggtgcaacttgcctgaa
aagagttcaaggaagagacaagattgttcatcatctgatgctgagaaatattccatgaaa
gaagatggttgtgattcttctgataagagactgaaaagaactgaattgagggaaagaaga
aatttaaatttcaagagaaataccaaggaagtacaaagtggctcatcgtcttctgatgtt
gaggaaagttctgaagataataaaaagctgaagaaacaaagagcttcagctaaaaagaag
gcaggcagtatcaaggagaaaatgagaaactccctaagaacaagcactaaaaggaagcaa
gctgacattacttcctcatcttcttctgatttaggagatgatgatcagaattctgtaggt
gaggggagcagtgatgagcagaaaattaagcctgtgactgaaaatttagtgctgtcttca
catactggattttgccaatcttcaggagatgaagccttatctaaatcagtgcctgtcaca
gtggatgatgacgacgatgacaatgatcctgagaatagaattgccaagaagatgctttta
gaagaaattaaagccaatctttcctccgatgaggatggatcttcagatgatgaatcagaa
gaagggaaaaaaagagctggaaaacacaatgaagaaaaccctggagatgaggaagcaaaa
aatcaagtcaattctgaatcagattcagattctgaagaatctaagaagccaagatacaga
cataggcttttaaggcacaggctgactgtgagtgatggagaatctggagaagaaaaaaag
atgaagcctaaagaacacaaagaagccaaaggcagaaacagaaggaaggtgagcagtgaa
gattctgaagattctgattttcaggaatcaggagttagtgaagaagttagtgaatctgaa
gatgagcaacggcccagaacaaggtctgcaaagaaagcagagttggaagaaaatcagcga
agttataaacagaaaaagaaaaggagacgcattaaagttcaagaagattcatccagtgaa
aacaagagtaattctgaagaagatgataaagaagaagatgaagatgaagaggaagaagaa
gatgaaaatgatgattctaagtctcctggaaaaggcagaaagaaaattcgaaagattctt
aaagatgataaactgagaacagaaacacagaatgctcttaaggaggaggaagagaggcga
aaacgtatcgctgagagggagcgtgagcgagagaaattgagagaagtgatagaaattgaa
gatgcttcacccaccaagtgtccaataacaaccaagctggttttagatgaagatgaagaa
accaaagaacctttagtgcaggttcatagaaatatggttatcaaattgaaaccccatcaa
gtagatggtgttcagtttatgtgggattgctgctgtgagtctgtaaaaaaaactaagaaa
tctccaggttcaggatgcattcttgcccactgcatgggccttggtaagactttacaggtg
gtaagttttcttcatacagttcttttgtgtgacaaactggatttcagcacagctttagtg
gtttgtcctcttaatactgctttgaattggatgaatgaatttgagaagtggcaagaggga
ttaaaggatgatgagaagcttgaggtctctgaattagcaactgtgaaacgtcctcaggaa
agaagctacatgctgcagaggtggcaagaagatggtggtgttatgatcataggctatgag
atgtacaggaatcttgctcaaggaaggaatgtgaagagtaggaaacttaaagaaatattt
aacaaagctttggttgatccaggccctgactttgttgtttgtgatgaaggccatattcta
aaaaatgaagcatctgctgtttcaaaagctatgaattctatacgatcaaggaggagaatt
attttaacaggaacaccacttcaaaataacctaattgagtatcattgcatggttaacttt
atcaaagaaaatttgcttggatccattaaggagttcaggaatcgatttataaatccaatc
caaaatggtcagtgtgcagattctaccatggtagatgtcagagtgatgaaaaaacgtgct
cacattctctatgagatgttagctggatgtgttcagaggaaagattatacagcattaaca
aagttcttgcctccaaaacatgaatatgtgttagctgtgagaatgactcctattcagtgt
aaactctatcagtactacttagatcacttaacaggtgtaggtaatagcagcgaaggggga
agaggaaaggcaggtgcaaaactgttccaagattttcagatgttaagtagaatctggact
catccttggtgtttgcagctggactatattagcaaagaaaataagggatattttgatgaa
gatagtatggatgaatttatagcttcagattccgatgaaacctccatgagtttaagctct
gatgattatacaaaaaagaagaaaacaaaggggaaaaaggggaagaaagatagtagctca
agtggaagtggcagtgacaatgatgttgaagtgattaaagtctggaattcaagatctcga
ggaggtggtgaaggaaatgtggatgaaacaggaaacaacccctcagtttctttaaagctg
gaagaaagtaaagctacttcctcttctaatccaagcagcccagctccagactggtacaaa
gattttgttacagatgctgatgctgaggttttagaacattctggaaaaatggtacttctc
tttgaaattcttcgaatggcagaggaaattggggataaagtccttgttttcagccagtct
ctcatatctctggacttgattgaagattttcttgaattggctagtagggagaagacagaa
gataaagataaacctcttatttataaaggtgaaggaaagtggctccgaaacattgactat
taccgtttagatggttctacaactgctcagtcaaggaaaaaatgggctgaagaatttaat
gatgaaactaatgttagagggcgattgtttatcatttccaccaaagcaggatctcttgga
attaatctggtagctgctaatcgagtgattatatttgatgcttcttggaatccatcttat
gacatccagagtatattcagagtttatcgctttggacaaactaagcctgtgtatgtatat
aggttcttagctcagggaaccatggaagataagatttatgatcggcaagtaactaagcag
tcactgtcttttcgagttgttgatcaacagcaagttgaacgtcattttaccatgaatgag
cttactgaactttatacttttgagccagacttgttagatgatcctaattcagaaaagaag
aagaaaagggatactcctatgctgccaaaggacaccatacttgcagaacttcttcagata
cataaagaacacattgtaggatatcatgaacatgattctcttttggaccacaaagaagaa
gaagagctgactgaagaagaaagaaaagcagcttgggctgagtatgaagcagagaagaag
gggctgaccatgcgtttcaacataccaactgggaccaatttaccccctgtcagtttcaac
tctcaaactccttatattcctttcaatttgggagccctgtcagcaatgagtaatcaacag
ctggaggacctcattaatcaaggaagagaaaaagttgtggaagcaacaaacagtgtgaca
gcagtgaggattcagcctcttgaagatataatttcagctgtatggaaggaaaacatgaat
ctctctgaggcccaggtacaggcgttagcattaagtagacaagccagccaggagcttgat
gttaagcgaagagaagcaatctacaatgacgtattgacaaaacaacagatgttaatcagc
tgcgttcagcgaatacttatgaaccgaaggctccagcagcagtacaatcagcagcaacag
caacaaatgacttatcaacaagcaacactgggtcacctcatgatgccaaagcctccaaat
ttaatcatgaatccttctaactaccagcagattgatatgagaggaatgtatcagtcagtg
gctggtggtatgcagccaccaccattacagcgtgcaccacccccaatgagaagcaaaaat
ccaggaccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
