Vicugna pacos (alpaca): 102527324
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Entry
102527324 CDS
T08098
Symbol
TNC
Name
(RefSeq) tenascin isoform X12
KO
K06252
tenascin
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04151
PI3K-Akt signaling pathway
vpc04510
Focal adhesion
vpc04512
ECM-receptor interaction
vpc05165
Human papillomavirus infection
vpc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102527324 (TNC)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102527324 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102527324 (TNC)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102527324 (TNC)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102527324 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vpc00536
]
102527324 (TNC)
Glycosaminoglycan binding proteins [BR:
vpc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102527324 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
EGF
NDNF
DUF4998
fn3_2
hEGF
Motif
Other DBs
NCBI-GeneID:
102527324
NCBI-ProteinID:
XP_006211434
UniProt:
A0A6I9IF78
LinkDB
All DBs
Position
4
AA seq
1928 aa
AA seq
DB search
MGVVTQLLGGVLLALLALPAEGGVLRTVIRHKRQSGMNVTLPEENQPVVFNHVYNIKLPV
GSQCSVDLESAGGEKDVAPPSEPRESFQEHTVDGENQIVFTHRINIPRRACGCAAAPDIK
ELLSRLEELESLVSSLREQCTTGAGCCLQPAEGRLDTRPFCSGRGNFSTEGCGCVCEPGW
KGPNCSEPECPGNCHLRGQCLDGQCVCDEGFTGEDCSQVACPSDCNDQGKCVNGACVCFE
GYSGEDCSQETCPVPCSEEHGRCVDGRCVCQDGFAGEDCREPLCLNNCHNRGRCVENECV
CDEGFTGEDCGELVCPNDCFDRGRCVNGTCFCEEGFEGEDCGRLTCPHACRGHGRCEEGQ
CVCDEGFAGADCGEERCPSDCHHRGRCVDGRCECDDGFAGADCGELQCPNGCSGHGRCVN
GQCVCDEGHTGEDCGQLRCPNDCHSRGRCVQGKCVCEHGFQGYDCSEMSCPNDCHQHGRC
VNGMCVCDDGYTGEDCRDLRCPRDCSNRGRCVDGQCVCEDGFTGPDCADLSCPSDCHGQG
RCVNGQCVCHEGFTGKDCGERRCPEDCHGRGRCVDGQCVCQEGFTGLDCGQRSCPNDCSN
WGQCVSGRCICNEGYSGEDCSQVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLVVYTPTH
EDGLEMQFRVPGNRTSTTIQELEPGVEYFIRVFAILENKKSIPVSARVATYLPAPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETTYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKRVTTTRLDAPSQIEVKDVTDTTALITWSKPLAEIDSIELTYGVK
DVPGDRTTIDLTHEENQYSIGNLKPDTEYEVSLISRRADMSSNPAKEAFTTGLDAPRNLR
RISQTDSSITLEWRNGKAAADSYRIKYAPISGGDHAEVEVPRSQQTTTKTTLTGLRPGTE
YGIGVSAVKGDKESDPATINAATDIDAPKDLQVSEPTETGLTLRWRTPLAKFDRYRLNYS
LPSGQPVEVQLPKDSTSYVLRGLAPGQEYAILLTAEKGRHKSKPARVKASTDHAPELENL
TVTEAGWDGLKLNWTAADQAYEHFVIQVQEANRVEAARNLTVPGSLRAVDVPGLKAATPY
RVTIYGVIRGYRTPVLSAEASTGETPHLGEVTVSEVGWDALKLNWTAPEGAYEQFLIQVQ
ETDTVEAAQNLSVPGGLRSVDLPGLKGATHYTITIRGVTRDSSTAPLSVEVLTEQVPDLG
NLTVSEVSWDALRLSWTSPDGIYEQFVIEVQEADQAKEAHSLMVPGSRRSVEIPGLRAGT
PYTVTLHGEVRGHRTQPLAVEVITAELPQLGDLAVTEAGWDGLKLNWTAADQAYEHFVIQ
VQEANRVEAARNLTVPGSLRAVDVPGLKAATPYRVTIYGVIRGYRTPVLSAEASTAMGSP
KEIIFSNITENSATVSWMAPTAQVERFRITYVPISGGTPSVVTVDGTKTQTRLLRLLPGT
EYLVSVIAVKGFEESEPVSGTLTTALDSPSGLVTANITDSEALAMWQPAIAPVDNYVISY
TGERVPEITRTVSGNTVEYALTNLEPATEYTLRIFAEKGPQKSSTISTKFTTDLDSPRDL
TATDVQSESALLTWRPSRASVTGYLLVYESVDGTVKEVVVGPDTTSYSLAELSPSTHYTA
RIQALNGALRSKVVQTVFTTTGLLYPFPRDCSQAMLNGDTTSGLYTIYLNNDKAQKLEVF
CDMASDGGGWIVFLRRKNGREDFYRNWKAYAAGFGDLKEEFWLGLDNLNKITAQGQYELR
VDLRDHGKTAYAVYDRFSVGDARTRYKLKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSAI
TNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKVRPSNFRN
LEGRRKRA
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcgtgactcagctgttggggggcgtcctcctagctttgctcgccctgcctgct
gaaggtggtgtcctcaggacagtcatccggcacaaaaggcagagcgggatgaatgtcacc
ctgccggaggaaaaccagccggttgtgtttaaccacgtctacaacatcaagctgcctgtg
gggtcccagtgctcggtggacctggaatcagccggtggggagaaagacgtggccccaccg
tcagagcccagggagagcttccaggagcacacagtggacggggaaaaccagatcgtcttc
acgcaccgcatcaacatcccccgccgggcctgcggctgtgccgctgctcccgacatcaag
gagcttctgagcagactggaggagctggagagcctggtgtcttccctgcgggagcagtgc
accacaggagcaggctgctgtctccagcctgccgaaggccgactggacaccaggcccttc
tgcagcggccgggggaacttcagcactgagggatgcggctgtgtgtgtgaacctggctgg
aaaggccccaactgctctgagcctgaatgtccaggcaactgtcacctgcgaggccagtgc
ctggacgggcagtgtgtgtgcgacgagggcttcacgggggaggactgcagccaggtggcc
tgtcccagcgactgcaatgaccagggcaagtgcgtgaacggggcctgcgtctgcttcgaa
ggctactcgggggaggactgcagccaggagacctgcccggtgccctgcagcgaggagcac
ggccggtgcgtggacggccggtgcgtgtgccaggacggctttgctggcgaggactgcaga
gagcccctgtgtctcaacaactgtcacaaccgcgggcgctgcgtggagaacgagtgcgtg
tgcgacgagggcttcacgggcgaggactgcggagagctcgtctgccccaacgactgcttc
gaccgcggccgctgtgtcaacggcacctgcttctgcgaggagggcttcgagggggaggac
tgcggccggctcacctgcccccacgcctgccgcggccacggccgctgcgaggagggccag
tgcgtgtgcgacgagggcttcgcgggcgcggactgcggtgaggagcgctgtccgtccgac
tgtcaccaccgcggccgctgcgtggacgggcggtgcgagtgtgacgatggctttgccggc
gcggactgcggcgagctccaatgtcccaatggctgtagcggccacggccgctgtgtcaac
gggcagtgcgtgtgtgacgagggccacaccggggaggactgtggccaactgcggtgcccg
aacgactgtcacagccgcggccgctgcgtgcagggcaagtgcgtgtgcgagcacggcttc
cagggctacgactgcagcgagatgagctgccccaacgactgtcaccagcacggccgctgc
gtgaacggcatgtgcgtctgtgatgacggctacacgggtgaggactgccgggatctgcgg
tgcccccgggactgcagcaaccggggccgctgcgtggacgggcagtgcgtgtgcgaggat
ggcttcaccggccccgactgtgcagacctctcctgccccagcgactgccacggccagggc
cgctgcgtgaacggccagtgcgtgtgccacgagggcttcacgggcaaggactgcggggag
cgcaggtgtcccgaggactgtcacggccggggccgctgcgtggacggccagtgcgtgtgc
caagagggcttcacggggctggactgcgggcagcgctcctgccccaatgactgcagcaac
tgggggcagtgcgtctcaggacgctgcatctgcaatgagggctactctggagaagactgc
tcccaggtgtcccctcccaaagacctcattgtgacggaagtaacagaagagaccgtaaat
ctggcgtgggacaatgagatgcgggtcaccgagtacctcgtcgtgtacacgcccacccac
gaggatggcctggaaatgcagttccgcgtccctggaaaccggacgtccaccaccatccag
gagttagagcctggcgtggagtactttatccgcgtgttcgccatcctggagaacaagaag
agcattccagtcagcgccagggtggccacctacctgcctgcacctgaaggtctaaaattc
aagtccatcaaggagacatctgtggaagtggagtgggatcctctggacattgcttttgaa
acgtgggaaatcatcttccggaatatgaataaagaagatgagggagagatcaccaaaagc
ctgcggaggccggagaccacgtaccggcaaactggcctagctcctgggcaagagtatgag
atatctctgcacatcgtgaaaaacaacactcggggccccggcctgaagagggtgacaacc
acccggttggacgcccccagccagatagaagtgaaagatgtcacagacaccaccgctcta
atcacctggtccaagcctctggccgagatcgacagcattgagctcacctacggggtcaaa
gacgtgccaggtgaccgcaccaccatcgacctcacacacgaggagaaccagtactccatc
gggaacctgaagccagacactgagtatgaggtgtccctcatctcccgcagggccgacatg
tctagcaaccctgccaaggaggccttcacaacaggcctggatgctcccaggaatctccgc
cgcatctcccagacagacagcagcatcaccctggagtggagaaacggcaaggcggccgct
gacagttacagaattaagtacgcccccatctccggaggtgaccatgccgaggttgaagtc
cccaggagtcaacaaaccacaaccaaaaccacgctcacaggtctgaggccaggaaccgaa
tatgggattggagtgtctgccgtgaagggggacaaggagagcgacccagccaccatcaat
gcggccacagacattgatgcgcctaaggaccttcaggtctctgagccgacggagaccggc
ctgaccctgcgctggaggacgccactggccaagtttgaccgttaccgcctcaactacagt
cttccctccggccagccagtggaggtgcagcttcccaaagacagcacctcctacgtcctg
agaggcctggcacctggacaggaatatgccatcctcctcacagcagagaagggcaggcac
aagagcaaacccgcacgggtaaaggcgtccacagaccacgcccctgaactggaaaacctc
accgtgaccgaggctggctgggatggcctcaaactcaactggaccgcagccgaccaggcc
tatgagcactttgtcattcaggtgcaggaggccaacagggtggaggcggctcggaacctc
acggtgcccggcagcctgcgggctgtggacgtcccgggcctcaaggctgccaccccttat
agagttaccatctacggggtgatccggggctataggacaccagtgctgtctgctgaggcc
tccacaggagaaactccccatttgggagaggtcacggtgtctgaggtgggctgggacgcc
ctcaaactcaactggacagctccggaaggagcctatgagcagtttctcattcaggtgcag
gagactgacacggtcgaggcagcccagaacctcagtgtcccgggaggactgaggtccgtg
gacctgcctgggctcaagggagccactcactataccatcaccatccgcggggtcactcgg
gactccagcactgcccctctctctgttgaagtcttgacagagcaggttccagatctggga
aacctcacggtgagcgaggttagctgggatgccctcagactgagctggaccagccctgat
gggatctatgagcagtttgtcatcgaggtccaggaggctgaccaggccaaagaagctcac
agtctcatggttcctggcagccggcgctccgtggaaatcccaggcctcagggctggtacc
ccttacacagtcaccctgcatggcgaggtcaggggccacagaacccaaccccttgctgtg
gaggtcatcacagcggagctcccccagctgggagacttagccgtgaccgaggctggctgg
gatggcctcaaactcaactggaccgcagccgaccaggcctatgagcactttgtcattcag
gtgcaggaggccaacagggtggaggcggctcggaacctcacagtgcccggcagcctgcgg
gctgtggacgtcccgggcctcaaggctgccaccccttatagagttaccatctacggggtg
attcggggctataggacaccagtgctgtctgctgaggcctccacagccatgggctccccg
aaggaaatcattttctcaaacatcactgaaaactcagccactgtcagctggatggcaccc
actgcccaggtggagcgcttccggatcacctatgtgcccatttcaggaggcacaccctcg
gtggtaactgtggatgggaccaagactcagaccaggctgctgagactcttacctggaacg
gagtacctggtcagcgtcatcgccgtgaaaggctttgaggagagcgagcctgtctcaggg
acactcaccacagctctggatagcccatctggcctggtgacagccaacatcactgactca
gaagccttggccatgtggcagccagccatcgcccccgtggacaattatgtcatctcctac
acaggggagagagtgccagaaattacacgcacggtgtctgggaacacggtggagtacgcg
ttgaccaatctcgagcctgccacggaatacacgctgcggatctttgcagagaaagggccc
cagaagagctcgaccatcagcaccaagttcacaacagacctcgattctccaagagacttg
actgctaccgacgttcagtcggaaagtgcccttctcacatggagaccctcccgagcctct
gtcaccggttacctattggtgtatgaatccgtggatggtacagtcaaggaagtcgtcgtg
ggtccagacaccacctcctacagcctggcagagctgagtccatcaacccactacacggcc
aggattcaggcactgaatggggccctgaggagcaaggtggtccagaccgtcttcaccaca
actggactcctgtacccattccccagggactgctcccaagccatgctgaatggagacacg
acctctggcctctacaccatttatctgaacaacgacaaggcccagaagctggaagtcttc
tgtgacatggcctctgacgggggcggatggatcgtattcctgagacgcaaaaacggacgt
gaggacttctaccgaaactggaaggcctacgctgctgggtttggggacctaaaagaagaa
ttctggcttgggctggacaacctgaacaaaatcacagcccaagggcagtatgagctccgg
gtagacctgcgggaccacgggaagacagcctatgccgtctacgaccggttcagcgtggga
gacgccaggactcgctacaaactgaaggtggaggggtacagcgggacagcaggtgactcc
atggcctaccacaatggcagatccttctccaccttcgacaaggacacggactcagccatc
accaactgtgcgctgtcctacaagggggctttctggtacaagaactgccaccgtgtcaac
ctgatggggagatatggggacaataaccacagtcagggtgttaactggttccactggaag
ggccacgaatattcaatccaatttgctgaaatgaaggtgagacccagcaacttccgaaat
cttgaaggcaggcgcaaacgggcataa
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integrated database retrieval system
