Vicugna pacos (alpaca): 102527605
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Entry
102527605 CDS
T08098
Symbol
CHD5
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
vpc
Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vpc03036
]
102527605 (CHD5)
Chromosome and associated proteins [BR:
vpc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102527605 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
HMG_box
AAA_22
Motif
Other DBs
NCBI-GeneID:
102527605
NCBI-ProteinID:
XP_015093906
LinkDB
All DBs
Position
13
AA seq
1814 aa
AA seq
DB search
MAEWGLDDVDYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSA
NNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQAPQPVPIRKAKTKEGKGPGVRKKIK
GSKDAKKKGKGRKVAGLKFRFGGVSSKRKKGSSSEEDEREESDFDSASIHSASVRSECSA
ALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKA
PEGKWSCPHCEKEGIQWEPKDDDDDEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSS
YHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPGV
PPPKALEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYG
SGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDL
PYDQCTWEIDDIDIPCYDNLKQAYWGHRELMLGEDARLPKRLIKKSRKLKDDKQEKPPDT
PIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIV
FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSF
EDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQS
KFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI
KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG
NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLR
DEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFL
LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEER
ITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPAT
PIPDVPSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTE
LQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYWEKLLRHHYEQQQEDLAR
SLGKGKRVRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSR
RQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLR
GKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEF
EHVNGKYSTPDLIPEGPEGKKPGEAVSSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMD
EKELGVQKPKKSPDIQALPTGLDRVEGEDKHESSDGKERAREEQLEETEKAQPSPEQLPK
EEVLLEKEKILDKLELSLIHSRGDGSDFRPDDTKAEEKEPIETQQNGDKEEDEEGKKEDR
NGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQ
DIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQD
PNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR
LPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQISSRPRDFPLVQRSFPAEPRLPG
PPPDPHRREKLPPF
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtggggcctggacgatgtggactacctgttctcagaggccgactaccacacg
ctgaccaactacaaggccttcagccagttcctcaggccactcatcgccaagaagaaccca
aagatccccatgtccaaaatgatgactgtcctgggcgccaagtggcgggagttcagtgcc
aacaaccccttcaagggcagctcggccgcggcagccgcggcggcagtggcagcggccgta
gagacggtcaccatcgcgcctccactggccatcagcccccagcaggcaccccagcctgtg
ccgatccgcaaggccaagaccaaggagggcaagggacccggggtgaggaagaagatcaaa
ggctccaaggatgcgaagaaaaagggcaaagggagaaaggtggccgggctcaagttccgc
tttggaggggtcagcagcaagaggaagaaaggctcctcgagtgaggaggatgagcgcgag
gagtcggactttgacagcgccagcatccacagcgcctccgtgcgctccgagtgttctgct
gccctggggaagaagagcaagaggaggcgcaagaagaagagaatcgatgatggtgatggc
tacgagacggaccaccaggactactgcgaggtgtgccagcagggtggggagatcatcctg
tgtgacacctgcccaagggcctaccacctcgtgtgcctggacccagagctggagaaagct
cccgagggcaagtggagctgtccccactgtgagaaggaggggatccagtgggagccgaag
gacgacgacgacgacgaggaggagggcggctgcgaggaggaggaggacgaccacatggag
ttctgccgcgtgtgcaaggacggcggcgagctgctctgctgcgacgcctgcccctcctcc
tatcacctgcactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgc
ccgcgctgtacttgtcccccgctgaagggcaaagtccagcggatcctgcattggaggtgg
acagagcccccggcccccttcatggtggggctgcccgggcccgatgtggagcctggtgtt
cctccacccaaggccctggagggcatcccagagagagagttctttgtcaagtgggctggg
ctatcctactggcactgctcctgggtgaaggagctgcagctggagctctaccacacggtg
atgtatcgcaactaccaaagaaagaacgacatggacgagccgcccccctttgactacggc
tctggcgacgaagacggcaagagcgagaagaggaagaacaaggacccgctctacgccaag
atggaggagcgcttctaccgctacggcatcaaacccgagtggatgatgatccaccgcatc
ctgaaccacagcttcgacaaaaagggggatgtgcattacctgatcaagtggaaagacctg
ccctacgaccagtgcacctgggagattgacgacattgacatcccctgctacgacaacctg
aagcaggcctactggggccacagggagctgatgctgggagaggacgccaggctgcccaag
aggctgatcaagaagagcaggaaactgaaggacgataaacaggagaagcccccggacacg
cccattgtggaccccacggtcaagtttgacaaacagccgtggtacatcgactccacgggc
ggcacgctgcacccctaccagctggagggccttaattggctgcgcttctcctgggcccag
ggcactgacaccatcctggccgacgagatgggcctgggcaagacggtgcagaccatcgtc
ttcctctactcgctgtacaaggaggggcactccaaggggccctacctggtcagcgcgccc
ctgtccaccatcatcaactgggagcgtgagtttgagatgtgggcacccgacttctacgtg
gtcacctacacgggggacaaggagagccgctccgtgatccgggagaacgagttttccttt
gaggacaacgccattcggagtgggaagaaggtgttccgcatgaagaaagaagtgcagatc
aaattccacgtcctcctcacctcctatgagctcatcaccatcgaccaggccatcctgggc
tccatcgagtgggcctgcctggtggtggacgaggcccaccggctcaagaacaaccagtcc
aagttcttcagggtcttgaacagctacaagatcgattacaagctgctgctgacggggacc
ccccttcagaacaacctggaggagctgttccacctcctcaacttcctgactccagagagg
ttcaacaacctggagggcttcctggaggaatttgctgacatctccaaggaagaccagatc
aagaaactgcatgacctgctggggccgcacatgctgcggcggctcaaggccgacgtcttc
aagaacatgccggccaagaccgagctgattgtccgtgtggaactgagccaaatgcagaag
aagtactacaagttcatccttacgcggaacttcgaggcgctcaactccaaggggggcggg
aaccaggtgtcgctgctcaacatcatgatggacctgaagaagtgttgcaaccacccctac
ctcttccccgtggccgccgtggaggcccccgtcctgcccaatggctcctatgatggcagc
tcgcttgtcaagtcttcagggaagctcatgctgctgcagaagatgctcaagaaactgcgg
gatgaaggacatcgtgtgcttatcttctcgcagatgaccaagatgctggacctcctggag
gacttcctggagtatgagggctacaagtatgagcggattgacggtggcatcactgggggc
ctccggcaagaggcaattgacagattcaacgccccgggggcccagcagttctgcttcctc
ctctcaacccgggcaggcggcctgggcatcaacctggccacggcagacacggtcatcatc
tatgactcggactggaacccccacaatgacatccaggcctttagccgcgcccaccgcatc
gggcagaacaagaaggtgatgatctaccgctttgtgacgcgggcctctgtggaggagcgc
atcactcaggtggccaagcgcaagatgatgctcactcatctggtggtgcggcccggcttg
ggctccaagtcgggctccatgaccaagcaggagctggacgacatcctcaagtttggcaca
gaggagctcttcaaggacgacgtggaaggcatgatgtctcagggccagcggcctgccacg
cccatccctgatgtcccatcctccaaagggggagccctggccgctagtgcgaagaaaaag
catggcagcaccccgccaggtgacaacaaggacgtggaggacagcagtgtgatccactat
gacgatgcggccatctctaagctactggaccggaaccaggacgccacggacgacacggag
ctgcagaacatgaatgaatacctgagctccttcaaggtggcacagtatgtggtgcgcgaa
gaggacggtgtggaggaggtggagcgggaggtcatcaagcaggaggagaacgtggacccc
gactactgggagaagctgctccggcaccactatgagcagcagcaggaggacctggcccgg
agcctgggcaagggcaagcgtgtccgcaagcaggtcaactacaacgacgcctcccaggag
gaccaggaatggcaggatgagctgtcagacaaccagtccgaatattccattggctccgag
gatgaggatgaggactttgaggaaaggccagaagggcagagtggacggcgacaatccagg
agacagctgaaaagcgacagggacaagcccctgcctcctcttcttgcccgggttggcggc
aacattgaggtgctgggcttcaacgcgaggcagcggaaggcctttctgaacgccatcatg
cgctggggcatgcccccccaggacgccttcaactcccactggctggtgcgggaccttcgc
ggaaagagcgagaaggaatttagagcctatgtgtccctcttcatgcggcacctgtgtgag
ccgggggctgatggcgccgagaccttcgcggatggcgtgccccgcgagggcctctccagg
cagcacgtgctcacgcgcatcggggtcatgtcactagttaggaagaaggttcaggagttt
gagcacgtcaacgggaagtacagcaccccggatctgatccccgagggtcccgagggcaag
aagccaggcgaggctgtctcctcggatcccaacacacccgtgcccgccagccctgcccac
cttctgcctgccccgctgggcctgccagacaaaatggaagcccagctgggctacatggat
gagaaggagctgggggtgcagaagccgaagaagtccccagacatccaggccctgccaact
ggcctggacagagtggagggcgaggacaagcatgagagctctgatggaaaggagagggcc
cgagaggagcaactggaggagacggagaaggcccagccctcaccggagcagctgccgaaa
gaagaagtgcttctggagaaggagaaaattctggacaagctggagctaagcttgattcac
agcagaggagatggcagtgatttcagaccagatgacactaaagcagaggagaaggagccc
attgaaacacagcaaaatggtgacaaagaggaagatgaggaggggaagaaggaggacagg
aatgggaagttcaaattcatgttcaacattgcagacgggggcttcacagagctacacaca
ctgtggcagaacgaggaacgtgccgctgtgtcctcggggaaaatctacgacatctggcac
cggcgccatgactactggctgctggcgggcatcgtaacgcacggctatgcccgctggcag
gacatccagaacgacccgagatacatgatcctcaacgagcccttcaagtctgagatccac
aagggcaactacctggagatgaagaacaagttcctggcccgcaggttcaagctgctggag
caggcactggtcattgaggagcagctccggagggccgcgtacctcaacatgacccaggac
cctaaccaccccgccatggccctcaacgcccgcctggccgaggtggagtgccttgccgag
agccaccagcacctgtccaaggagtctcttgctgggaacaagcccgccaacgccgtcctg
cacaaggtcctgaaccagctggaggagctactgagcgacatgaaagcggacgtgacacgc
ctgccctccatgctgtcccgcatccccccggtggccgcccgcctccagatgtctgagcgc
agcatcttgagccgcctgaccaaccgagccggcgaccccaccatccagcagatatctagc
cgtccccgagacttccctctggtgcagcgctcgtttcctgcagagccacgcctgccgggc
cccccacctgacccccacaggagagaaaagctgcctcctttctag
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integrated database retrieval system
