Vicugna pacos (alpaca): 102527640
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Entry
102527640 CDS
T08098
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04360
Axon guidance
vpc04724
Glutamatergic synapse
vpc04726
Serotonergic synapse
vpc04929
GnRH secretion
vpc04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
102527640 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
102527640 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
102527640 (TRPC1)
04726 Serotonergic synapse
102527640 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
102527640 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vpc04040
]
102527640 (TRPC1)
Ion channels [BR:
vpc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102527640 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
102527640
NCBI-ProteinID:
XP_006202835
UniProt:
A0A6I9I550
LinkDB
All DBs
Position
1
AA seq
794 aa
AA seq
DB search
MMAALYPSTDLSGASSSSSLPSSPSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAID
SEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGI
FWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNMYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNK
FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGK
FLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIF
SLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKE
WKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKE
WRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLL
GFRTSKYAMFYPRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccttgtacccgagcacggacctctcgggcgcctcctcctcctcctccctg
ccttcctccccatcctcttcgtcgccgaacgaggtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaacaccctgaacgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaatgaaaacttggatata
ctgcagcttcttttggactacggttgtcagtccgcagatgctcttttggtggcaatcgac
tctgaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatcaaga
ccaactatagtaaaactaatggagcgaattcagaatcctgagtattcaacgactatggat
gttgcccctgtcattttagctgctcatcgtaacaactatgagattcttacaatgttgtta
aagcaggatgtgtccctacctaagccccatgcagttggctgtgaatgcacattgtgttct
gcaaaaaacaaaaaggacagcctccgacattccaggtttcgtcttgatatatatcgctgc
ttggccagtccagctctaataatgttaacagaggaggatccaatcctgagagcatttgaa
ctgagtgctgatttgaaagaactaagtcttgtggaggtggaattcaggaatgattatgaa
gaactagcccggcaatgtaaaatgtttgctaaagatttgcttgcacaagcccggaattca
cgcgaattggaagttatcctaaaccatacatctagtgatgagcctcttgacaaacgggga
ttactagaagaaagaatgaatttaagtcgtctaaaactcgctatcaaatataaccaaaag
gagtttgtctcccagtctaactgccagcagttcctgaacaccgtttggtttgggcagatg
tcaggttaccgacgtaagcctacctgtaagaagataatgactgttttgacagttggcatc
ttttggccagttttgtcactttgttatttgatagctcccaaatctcagtttgggaggatc
attcacacaccttttatgaaatttattattcatggagcatcgtatttcaccttcctgctg
ttactcaacatgtactctcttgtctataatgaggataagaaaaacacaatggggccagcc
cttgaaagaatagactatcttcttatactgtggattattggaatgatttggtcagacatt
aaaagactctggtatgaagggttggaagactttttagaagaatctcgtaatcaactcagt
tttgtcatgaattcactttatttggcaacctttgccctcaaagtggttgctcacaacaag
ttccatgattttgctgatcggaaggactgggatgcgttccatcctaccctggtggcagaa
gggctttttgcatttgcaaatgttctgagttatcttcgtctcttttttatgtatacaaca
agctctatcttgggtccattacagatttcaatgggacagatgttacaagattttggaaaa
tttcttgggatgtttcttcttgttcttttttctttcacaattggactgacacaactgtac
gataaaggctatactccaaaagaacagaaggactgtgtcggcatcttctgcgaacagcaa
agcaatgataccttccactcgttcattggcacttgctttgctttgttctggtatattttc
tccttagcacacgtggcaatctttgtcacaagatttagctatggagaagaactgcagtcc
tttgtgggagccgtgattgttgggacgtacaatgtcgtggttgtgattgtgctcaccaag
ctgctggtggcaatgcttcacaaaagttttcagttgatagcaaatcatgaagacaaagaa
tggaagtttgctcgagcaaagttgtggcttagctacttcgatgacaaatgtacattaccc
ccacctttcaatatcattccttcgcccaagactatctgctatatgattagcagcctcagt
aagtggatttgctctcatacatcaaaaggcaaggttaaacggcagaacagtttaaaggaa
tggagaaatttgaaacaaaagagagatgaaaactaccaaaaagtgatgtgctgtttagtg
catcgttacttgacttccatgagacaaaagatgcaaagtacagatcaggcaactgtggaa
aatctaaatgaactgcgccaagatctgtcaaaattccgaaatgaaataagagatttactt
ggctttcggacttctaaatatgctatgttttatccaagaaattag
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