KEGG   Vicugna pacos (alpaca): 102527902
Entry
102527902         CDS       T08098                                 
Symbol
KDM5C
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
vpc  Vicugna pacos (alpaca)
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vpc01009]
    102527902 (KDM5C)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vpc03036]
    102527902 (KDM5C)
Enzymes [BR:vpc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102527902 (KDM5C)
Protein phosphatases and associated proteins [BR:vpc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102527902 (KDM5C)
Chromosome and associated proteins [BR:vpc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102527902 (KDM5C)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD ASH2L-like_WH
Other DBs
NCBI-GeneID: 102527902
NCBI-ProteinID: XP_006218330
UniProt: A0A6I9IQN8
LinkDB
Position
X
AA seq 1560 aa
MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVV
EEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRP
FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
AGPKMMGLGLMAKDKTLRKKDKEGPECPPTVVVKEESGGDVKVESTSPKTFLESKEELSH
SPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPE
IPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTEL
VEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMP
VLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL
AAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRA
YHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDL
NLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALA
CYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVA
LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGLVSGQEAGP
HRVAGLQMTLAELRAFLDQMNNLPCAMHQIGDVQGILEQVEAYQAEAREALASLPSSPGL
LQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASV
APSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQ
ALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHS
WREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDL
RDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSTTASSATSICVCGQVPAGVGAL
QCDLCQDWFHGRCVSVPRLLSSPRPGPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILA
LLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQAEPR
PEEPPTYPSAPASDPLREGSGKDMPKVQELLENGDSVISPEKVAPGEGSGKRDLELLSSL
LPQLTGPVLELPEATRAPLEELMLEGDLLEVTLDENHSIWQLLQAGQPPDLERIRTLLEL
EKAERHGSRARGRALERRRRRKVDRGGEVDDPAREELEPKRVRSSGPEAEEAQEEEELEE
ETGGEGPPPPLPTAGSPSTQENQNGLEPALGASSGSSAPFSTLTPRLHVPCPQQPPQQQL
NT seq 4683 nt   +upstreamnt  +downstreamnt
atggagccagggtccgacgactttctaccgccgccggagtgcccggtgttcgagcctagc
tgggctgagttccgagaccctcttggctacatcgcgaaaatcaggcccatcgccgagaag
tcgggcatttgcaagatccgcccacccgcggactggcagccaccctttgctgtagaagtg
gacaacttcaggtttactcctcgaatccagaggctgaatgaactagaggcccagacgaga
gtgaaactgaactacttggatcagattgccaaattctgggaaatccagggctcctcctta
aagattcccaatgtagaacggcggatcttggacctctacagcctcagcaaaatcgttgtg
gaggaaggtggctatgaagccatctgcaaggatcgtcggtgggcccgggtggcccagcgc
ctcaactacccaccgggcaaaaacattggctccttgctgcgctcccactatgaacgcatc
gtttacccatatgagatgtaccagtctggagccaacctggtgcagtgcaacacacgtcca
tttgataatgaggagaaggacaaggaatacaaaccccacagtatcccccttcggcagtct
gtgcagccttctaagttcaacagctatggccggcgggctaagagactgcagcctgatccg
gaacccacagaggaagacattgaaaagaatcctgagctgaagaagcttcagatctatggg
gcaggccccaagatgatgggcctgggcctcatggccaaggataagactctgcggaagaaa
gataaggaagggcctgagtgcccccctacagtagtggtgaaggaggagtcaggtggggat
gtgaaggtggagtcaacctcacccaagaccttcctggaaagcaaggaggagctgagtcac
agcccagagccctgcaccaagatgaccatgaggctgcggaggaaccacagcaatgcccag
tttattgaatcatatgtatgccggatgtgttcccgaggggatgaggatgacaagctcctg
ctgtgtgatggctgtgatgacaactaccacatcttctgcttgttgcctcctttgcctgag
attcccaagggtgtctggcggtgcccaaaatgtgtcatggcggagtgtaaacgccccccc
gaagcctttggctttgagcaggctacccgggaatacactctgcagagctttggcgagatg
gctgactcctttaaagccgattacttcaacatgcccgtacacatggtgcccacagaactc
gtggagaaggaattctggcggctggtgaatagcattgaggaagacgtgactgttgagtat
ggggctgacatccattccaaagaatttggtagcggtttccctgtcagtgacagtaagcgg
cacttaacacctgaggaggaggagtatgctaccagtggttggaacctgaatgtgatgccg
gtgttggagcagtccgtactgtgccacattaatgcagatatctccggcatgaaggtgccc
tggctctacgtgggcatggtcttctcagccttttgctggcatattgaggatcactggagt
tactccattaactacctccactggggtgagccgaagacctggtatggggtaccctcgctt
gcagcagaacatttggaagaggtgatgaagaagctgacacctgagctctttgatagccag
cctgaccttctgcaccaacttgtcactctcatgaatcccaataccctcatgtcccatggc
gtgccggttgttcgcacaaaccagtgtgcaggagaattcgtcattaccttccctcgtgct
taccacagtggcttcaaccaaggctacaactttgctgaggccgtcaacttttgcactgct
gactggctgccggctggacgccagtgcattgagcactaccgccggctccgaagatactgc
gtcttctcccatgaggagctcatctgcaagatggctgcctgtccagagaagctggacctg
aaccttgcagcagctgtgcacaaggaaatgttcatcatggtgcaggaggagcggcgtcta
cgaaaggccctgctagagaagggcatcacggaagctgagcgagaggcttttgagctgctc
ccggatgatgagcgccagtgcatcaagtgcaagaccacgtgctttctatcagccctggcc
tgctatgactgcccagacggccttgtctgcctttcccacatcaatgacctctgcaagtgc
tccagtagccggcagtacctgcggtatcggtataccttggatgagctccctgccatgctc
cataagctgaaggtccgggctgagtcctttgacacctgggccaacaaagtgcgagtggcc
ctggaggtggaggatgggcggaagcgcagccttgaagagctgagagcactggagtctgag
gcccgtgagcggaggtttcctaacagtgagctgctgcagcgactcaagaactgcctgagt
gaggcagaggcttgtgtgtcccgggctctggggctggtcagcggccaggaagctggcccc
cacagggtagctggtctacagatgaccctggctgagctccgggcctttctggaccagatg
aacaacctgccttgtgccatgcaccagattggggatgtccagggtattctggaacaggtg
gaggcctaccaggctgaggcccgtgaggccctggcctcactgccctccagtccagggctc
ttgcagtccctgttggagagggggcggcagctgggggtggaggtacctgaggcccagcag
ctccagcggcaggtggaacaggcgcgatggctggatgaggtgaaacgcacactggccccc
tcagcccgaaggggtaccctggctgtcatgcggggactgttggtcgcgggtgccagtgta
gcccctagccctgctgtggacaaggcccgagctgaactgcaggagctgctgaccattgct
gaacgctgggaggaaaaggcccacctttgcctggaggccaggcagaagcatccaccagcc
acgcttgaggccataattcatgaggcagaaaacatccctgttcacctgcccaacatccag
gctctaaaggaggctcttgctaaggcccgggcctggattgctgatgtggacgagatccaa
aatggtgatcactacccctgcctggatgacttggagggcctggtggctgtgggccgggac
ctacctgtggggttagaggagctgagacagctagagctgcaggtactgacagcgcactcc
tggagggagaaggcctccaagaccttcctcaagaagaattcttgctacactctgctggag
gtgctctgcccgtgtgcagacgccggctcagacagcaccaagcgcagccggtggatggag
aaggagctggggttgtacaaatctgacacagagctgctggggctgtctgcgcaggacctc
agggacccaggctctgtgatcgtggcctttaaggagggggaacagaaggagaaggaggga
atcctgcagctgcgtcgcaccaactccgccaagcccagtccactggcatcgtcgaccaca
gcttcctctgcaacctccatctgtgtgtgtgggcaggtgccggccggggtgggagctctg
cagtgtgacctgtgtcaggactggttccatgggcgatgtgtgtcggtaccccgcctcctc
agttccccaaggcctggtcccacctcatccccactgctggcctggtgggagtgggacacc
aaattcttgtgtccgctgtgcatgcgctcacggcgcccgcgcctggagaccatcctggca
ctgctggtagcgctgcagagactgcctgtgcggctgcctgagggcgaggccctacagtgc
ctcacagagagagccatcagctggcaaggccgtgccaggcaggctctagcctctgaggat
gtgactgctctgttgggacggctggccgagcttcgccagcggctgcaggctgaacccagg
cccgaggagccccctacctacccttcagcccctgcctctgaccctctcagagaaggcagt
ggcaaggatatgcctaaggtgcaggagttactggagaacggagacagcgtgatcagtcct
gagaaggtagccccgggggagggctcaggtaagagagacctggagctgctgtcctcactg
ttgccacagttgactggccctgtattggagctgcctgaggcaacccgagctcccctggag
gagctcatgttggagggggatctgcttgaggtgaccctggatgagaaccacagcatctgg
cagctgctgcaggctggacagcctccagacctggagcggattcgcacacttctggagctg
gagaaggcagagcgccatgggagccgagcccggggccgggcactggagaggcggcggcgg
cggaaggtggaccggggtggggaggtcgatgacccagcccgagaggagctagagccaaag
agggtacggagctcagggccagaggccgaggaggcccaggaggaggaggagctggaggag
gagactgggggtgagggcccccctccacccctgcccaccgccggcagccccagcacccag
gagaaccagaatggcttggagccagcactaggggccagttcaggctcctcggcccctttc
tccactttgactccccggctgcacgtgccctgcccacagcagccgcctcagcagcagttg
tga

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