Vicugna pacos (alpaca): 102527960
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Entry
102527960 CDS
T08098
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102527960 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vpc04131
]
102527960 (TGFBRAP1)
Membrane trafficking [BR:
vpc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102527960 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
Motif
Other DBs
NCBI-GeneID:
102527960
NCBI-ProteinID:
XP_031547817
UniProt:
A0A6J3BQV9
LinkDB
All DBs
Position
28
AA seq
868 aa
AA seq
DB search
MFCGRPAAAMMSTKAFTLVPAVERELLQGDKEWVSLECVECCGRNLYLGTSDCFVHHFLL
EEKVLPAGTATFTATKQLHRHLGFKKPVNELRAASALSRLLVLCDSSITLVHMLSLEPVP
SGARIKGATAFALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPL
AVAVDGHFLCLALTTQYIILNYSTGAAQDLFPYCGEERRPIVKRIGRQEFLLAGPGGLGM
FATVAGISQRAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQ
DFEGRVIVATSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRR
VLQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLCPFLLPASSSFTRSHPPLHEFADLS
QLTQGDQEKVAKCKRFLMSYLNEVRSTEVANGCREDIDTALLKLYAEANHESLLDLLVTE
NFCLLPDSAAWLEKHKKYFALGLLYHYNHQDAAAVQLWVNIVNGDIHDATRSDLYEYIVD
FLTYSLDPELVWKYADWALQKSQEVGVQVFTKRPLDAQQSSFNPADVIACLKKYPQALVK
YLEHLVVDRRLQKEEYHTHLAVLYLDEVLQQKPGATGQGAEVTETQAKLRRLLQKSDLYR
VHILLDRIRGAGLPMERAILHGRLEQHEEALHILVHELGDFAAAEDYCLWRSEDRDPPYR
RRLFHLLLGLCLRPGPSAHELAVAAVDLLNRHATEFDAAQVLQLLPGTWSVQLLRPFLMG
AVRDSVHARRSAQVAVGLARSENLIYKYDKMKLKGSSVRLSDKKLCQMCQNPFCEPTFVR
YPNGGLVHTHCAAGRHTNPSSPSPGTRT
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcggcagaccagccgcagccatgatgagcaccaaggccttcaccctggtcccc
gctgtggagcgggagctgctgcagggcgacaaggagtgggtctcgctggagtgcgtggag
tgctgtggcaggaacctgtacctgggcaccagcgactgcttcgtgcaccacttcctgctg
gaggagaaggtcttgcccgccggcacggccaccttcacggccaccaagcagctgcacaga
cacctgggtttcaagaagccagtgaacgagctgcgggcggcgtcggcgctgagccggctg
ctggtgctgtgcgacagctccatcaccctggtccacatgctgagcctggagcccgtgccc
tcgggcgcccgcatcaagggcgccacagccttcgccttgaacgagaacccggtgagcggg
gacccattctgcgtggaagtctgcatcatctccgtcaagcgcaggaccatccaggtgttc
ctggtgtatgaggaccgcgtgcagatcgtccgggaggtgtccacgccagagcagcccctg
gccgtggcagtggatggccacttcctgtgcctggcactcaccacccagtacatcatcctc
aactacagcacgggcgccgcccaggacctgttcccctactgcggggaggagcggcggccc
atcgtcaagaggatagggagacaggagttcctgctggcgggccctgggggcctgggcatg
ttcgccacggtggccggcatatctcagcgcgccccggtgcactggtcggagaacgtgatc
ggggcggccgtctgcttcccgtacgtcattgccctggatgacgagttcatcacggtgcac
agcatgttggaccagcagcagaagcagaccctgccctttaaggaagggcacatcctacag
gatttcgaaggaagagtgattgtcgccacaagtaaaggcgtttacatcttggttccatta
cctctggaaaagcagattcaggaccttctagccagccgccgagtggaagaggctctggtc
ctggcgaaaggcgcccggaggaacattccaaaggagaaatttcaggtgatgtacaggagg
gttctgcagcaggcgggcttcatacagtttgcacagcttcagttcctggaagctaaggaa
ctcttcagaagcggccagctcgacgtgcgggagctcatctccctctgccccttcctgctg
cctgcctcctcgtccttcacccgctcccaccctcccctgcacgagttcgcagacctgagc
cagctgacccagggcgaccaggagaaggtggccaagtgcaagcgcttcctcatgagctac
ttgaatgaggtccgcagcacggaggtggccaatggctgcagggaggacatcgacacggcc
ctgctcaaactgtacgcggaggccaaccacgagagcctgctggacctcctggtcaccgag
aacttctgcctgctccccgacagcgccgcctggctggagaagcacaaaaaatactttgca
ctgggactgctctaccattacaaccaccaggacgccgcagcagttcagctctgggtgaac
attgtcaacggggacattcacgacgccacccgctcagacttgtacgagtacatcgtggac
ttcctcacctacagcctcgacccggagctggtgtggaaatacgccgactgggccttgcag
aaaagtcaggaggttggagttcaggttttcaccaagagacccttggacgcacagcagagc
agctttaacccggctgatgttatcgcttgccttaagaaataccctcaggctctggttaag
tacctggagcatctcgtcgtggacaggaggctgcagaaggaggagtaccacacgcactta
gctgtcctctacctggacgaggtgctgcagcagaagcccggcgccactggccagggcgca
gaggtgaccgagacgcaggcgaagctgcgacgcctgctccagaaatccgacctgtaccgc
gtccacattctgctagacaggatccggggtgccgggctccccatggagcgggccatcctg
cacgggaggctggagcagcacgaggaggcgctgcacatcctcgtgcacgagctgggggac
ttcgcggcggccgaggactactgcctgtggcgctccgaggacagggacccaccctaccgc
cggcggctcttccacctgctgctaggcctctgcctgcggcccggcccctccgcgcacgag
ctggccgtggccgccgtggacctgctgaaccgccacgccaccgagttcgatgccgcccag
gttctgcagctgctgcccggcacctggtcggtgcagctgctccgcccattcctgatgggg
gcggtgagggacagcgtgcacgcccggaggagcgcgcaggtggccgtggggctggccagg
tctgaaaacttgatctacaaatacgataagatgaaactgaagggaagctccgttcggctc
tcagacaaaaagctttgccagatgtgccagaaccccttctgtgagcccacgtttgtcagg
tacccgaacgggggtctggtccacacccactgtgcggccggcagacacacaaaccccagc
tcccccagccctgggactcggacttga
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