KEGG   Vicugna pacos (alpaca): 102528079
Entry
102528079         CDS       T08098                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
vpc  Vicugna pacos (alpaca)
Pathway
vpc04710  Circadian rhythm
vpc04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:vpc00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    102528079 (PER1)
   04713 Circadian entrainment
    102528079 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vpc03400]
    102528079 (PER1)
DNA repair and recombination proteins [BR:vpc03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    102528079 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 102528079
NCBI-ProteinID: XP_015106274
UniProt: A0A6J0AZA0
LinkDB
Position
Unknown
AA seq 1283 aa
MSGPLEGADGGGDPRPEEPFCPGGSPSPGPPQHRPRPGPSLADDTDANSNGSSGNESNGP
ESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPS
TSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQE
YYQQWSLEEGEPCAMDMSTYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISEQAGL
LLRCKRDVFRGTRFSELLAPQDVGVFYGSTAPSRLPTWGTGASAGSGLKDFTQEKSVFCR
IRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIF
TTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPF
DHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPSPAL
SLDPDIQELSEQIHRLLLQPVHSPSPMGLCGVGPVTSPGPFLSPGSSSDTNGDDAEGPGP
PAPVTFQQICKDVHLVKHQGQQVFIESRARPLPRPRIPATGTFKAKTLPCQASDPELEVA
PAPVQAPLALAPEEAERKEASSCSYQQINCLDSILRYLESCNIPSTTKRKCASSSSCTTS
SASDDDKQRPSPVSVGTKKDPSAVLSGEGAAPRKEPVVGGTLSPLALANKAESVVSVTSQ
CSFSSTIVHVGDKKPPESDIIMMEDLPGLPPGPAPSPAPSPAPSPMVAPDPAPDAYRPVG
LTKAVLSLHTQKEEQAFLSRFRDLSRLRGLEGSSTTPSAPGCHHGPAPPGRRHHCRSKAK
RSRHHQTPRAEAPCYVSHPSPVPPSAPWPPPPTTTPFPAVVQPYSLPVFSPRGGPQSLPP
APTSVPPAAFPAPLVTPMVALVLPNYLFPTPSSYPYGVPPAPAEGPLTSASHSPSPPLPA
LPPSPPHRPDSPLFNSRCSSPLQLNLLQLEEPPRVEGGAVTGGPGSSAGPPPPSEEAAEP
DARLVEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGSGAGSHEGGSTSAS
ITRSSQSSHTSKYFGSIDSSEAEAGAVQARAEPGDQVIKYVLQDPIWLLMANADQHVMMT
YQVPSRDVASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVMACVD
CGSSTQDPGHPDDPLFSEMDGLGLEPMEEGGGEGGSGEGEGGDETLAQTGARVSSSQDLA
MEEEEQGGSSSSPALLAIENGTS
NT seq 3852 nt   +upstreamnt  +downstreamnt
atgagcggccccctagaaggggctgatgggggaggggaccccaggccggaggaacccttt
tgtcccggagggtccccatcccctgggcctccacagcatcgacctcgtcctggccccagc
ctggctgatgacacagacgccaacagcaatggctccagcggcaatgagtccaatgggccc
gagtccagaggtgcatctcagcggagctcacacagctcctcttctggcaatggcaaggac
tcggccctgctggagaccactgagagcagcaagagcacaaactctcagagcccatcccca
cccagcagttccattgcctacagcctcttgagtgccagctcagagcaggataacccgtct
accagtggctgcagcagtgaacagtcagccagggcaaggacccagaaggaactcatgacg
gcactgcgggagctcaagcttcggctgccaccagagcgcaggggcaagggccgctctggg
accctggctacgctacagtacgcactggcctgtgtcaagcaggtgcaggccaaccaggaa
tactaccagcagtggagcctggaggagggtgagccttgtgccatggacatgtccacctac
actctggaggagctggagcacatcacatctgaatacacacttcgcaaccaggataccttc
tccgtggctgtctccttcctgacaggccgcatcgtctacatttctgagcaggcagggctc
ctgctgcgttgcaagcgggatgtgttccgaggcacccgcttctcagagctcctggctccc
caggacgtgggcgtcttctatggttccactgccccatctcgcctgcccacctggggcacg
ggggcctcggcaggttcaggcctcaaggacttcacccaggagaagtctgtcttctgccgt
atcagaggaggtcctgaccgggatccagggcctcgataccaaccattccgcctaaccccg
tatgtgaccaagatccgggtctcggatggggcccctgcacagccgtgctgcctgctcatt
gcagagcgcatccactctggttatgaagctcctcggattccccccgacaagaggatcttc
accacacggcacacgcctagctgcctcttccaggatgtggatgaaagggctgccccactg
ctgggataccttccccaggacctcctgggggccccagtgctccttttcctgcatcctgag
gaccgacccctcatgctggccatccataagaagatcctgcagctggctggccagcccttt
gaccactcccctatccgcttctgcgcccgtaatggggagtatgtcaccatggataccagc
tgggctggctttgtgcatccctggagccgtaaggtggcctttgtgttgggtcgtcacaaa
gtacgcacggcacccctgaacgaggatgtgttcacccccccagcccccagccccgctctg
tccctggaccctgacatccaggagctctccgagcagatccaccggctgctattacagcct
gtgcacagccccagccccatggggctctgtggagtcggccctgtgacttccccaggccct
ttcctcagccctggctcctccagtgacaccaatggagatgatgctgagggacctgggcct
cctgccccggtgacgttccagcagatctgtaaggatgtgcatctggtgaagcatcagggg
cagcaggtttttattgagtcccgggccaggcctctgccccggccccgcatccctgctaca
ggtacattcaaggctaagacccttccttgccaagcctcagacccagagttggaggtggcc
cctgctccagtccaggccccactagccttggcccctgaggaggctgagaggaaagaagcc
tccagttgctcctaccagcagatcaactgcctggacagcatcctcaggtacctggaaagc
tgcaacatccccagcacgaccaagcgcaaatgtgcctcctcctcctcctgcaccacctct
tcagcctccgatgacgacaagcagagaccaagccctgtctctgtggggaccaagaaagat
ccatcggcagtgctgtctggggagggggccgcccctcggaaggagccggtggtgggaggc
accctgagcccgctcgccctggccaataaggcggagagtgtggtgtctgtcaccagtcag
tgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggacatc
atcatgatggaagacctgcctggcctgcctccaggcccagctcccagcccagcccccagc
ccagcccccagccccatggtagccccagacccagccccagacgcctaccgcccggtgggc
ctgaccaaggctgtgctgtccctgcacacgcagaaggaggagcaggccttcctcagccgc
ttccgtgacctcagcaggctgcgtggactcgagggctcctccacgactccctccgcccct
ggctgccatcatggccctgcaccccctggccgccgacaccactgccgatccaaagccaag
cgctcacgccaccaccagacccccagggctgaagccccctgctatgtttcccacccctct
cctgtgccaccttctgccccttggcccccaccaccgaccaccacacccttcccagctgtg
gtccagccctactccctcccagtgttctcccccagaggaggcccccagtctcttcctcct
gcccccacctctgtgcctcctgcagctttccctgcccctctggtgaccccaatggtggcc
ttggtgctccctaactatctgttccctaccccatccagctatccctatggggtaccccca
gcccccgccgaggggcctctcacttctgcctcccactccccttctccacccctgcctgca
ctgccgcccagccctccccaccgcccggactctccactcttcaactcgaggtgtagctcc
ccgctccagctaaatctgctgcagcttgaggagcccccccgtgttgaggggggtgctgtc
acagggggccctgggagcagtgctgggcctccgcctcccagtgaggaggctgctgagcca
gacgccagactggtggaggtaactgagtcctccaaccaggatgcactctctggctccagc
gatctgctggagttgctgctgcaggaggattctcgctctggcacaggctctgctgcctcg
ggttctttgggctcaggatctggggcaggctcccatgaggggggcagcacctcagctagc
atcacacgaagcagtcagagcagccacacaagcaaatactttggaagcatcgattcttcc
gaggcggaggctggggctgtccaggccagggctgagcctggggaccaggtcattaagtac
gtgctccaagatcccatctggctgctcatggccaatgctgaccagcatgtcatgatgacc
taccaggtgccctccagggacgtagcctctgtgctgaagcaggatcgggagcgtctccgg
gccatgcagaagcagcagcctcggttctcggaggaccagcggagggaactgggtgctgtg
cactcctgggtccggaagggccagctgcctcgggcccttgatgtgatggcctgtgtggac
tgcggtagtagcacccaagaccctggccaccctgatgacccactcttctcagaaatggat
ggactggggctggagcccatggaggagggtggaggcgagggtggtagtggtgagggtgag
ggtggagatgagaccctggcccaaactggggccagggtctcgagctctcaggacctggcc
atggaggaagaggaacaaggtgggagctcatccagtccagccttacttgccatagaaaat
ggcaccagctag

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